Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq97 185 1e-41 >seq97 Length=72787 Score = 185 bits (204), Expect = 1e-41 Identities = 526/801 (66%), Gaps = 8/801 (1%) Strand=Plus/Minus Query 71691 GTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTAT 71750 |||||| || | || |||||||| || ||||| ||||||| || || |||| | Sbjct 69942 GTTCAACGCGATCGACGCCAGATTGCAGACGGCGACCTCATCAGGGGCGCTGTATTCGAC 69883 Query 71751 AATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 71810 ||||| ||||| || || || || ||||| ||||| | || || || || ||||| Sbjct 69882 GATTTCGGTGCACAGGTTGCTGCATTTGATCGTTCCGAGGTTCTGCTGGTTGCTCTTACG 69823 Query 71811 GTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAAT 71870 ||| || || || || ||||| || | || || |||||||| | |||| || || Sbjct 69822 GTTGCAGGCGTCTTTGTAAAGCATGTAGGGGGTGCCAGTTTCGACTTGAGCGCTGATGAT 69763 Query 71871 CGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTG 71930 ||||||| | |||||||| || || | | | ||| || ||||||| Sbjct 69762 GTGCTTCCAGAGATCGCGAGCCTTGATCTGCTTTCGGAAACGCTTCTCCGACTCGTATTT 69703 Query 71931 TGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTG-TCTAATCCAGGACATTCATTCG 71989 || || | ||||||| || ||||| ||| | || | || || || || | | Sbjct 69702 CGTGTAGAGCTCCTCGAACTTCTCGCCCCA-GCAGTCCTCAAGACCGGGGCACTCGTGGG 69644 Query 71990 GACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCC 72049 | ||||||| ||||| || || | || || ||||| || ||||| || |||| Sbjct 69643 GGCACATCAGAGACCAGGTGCCGTCGGTTTCCACGCGCTTCATGAAAAGATCGGGGATCC 69584 Query 72050 AAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 | ||||| ||| || ||||| | || | | ||||| || |||||| || | | Sbjct 69583 AGAGAGC-ATAGAAGAGATCACGGGCACGCTCTTCCTCAGCACCACGATTCTTCTTCATA 69525 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 || | || | | | || || | ||||||||||| | ||| ||||| | | | || || Sbjct 69524 TCCATGACCTCAAAGATGTCTGCGTGCCACGGTTCGAGGTAGATGGCGAAAGCGCCAGGA 69465 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 || |||||||| |||||||| | ||| | ||| ||||| || | || | | ||| || Sbjct 69464 CGCTTGTTTCCGCCCTGATCGACGTAGCGAGCAGTGTTGTTGAATACACGGAGCATCGGG 69405 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTG 72288 | || |||||||| | || ||| || | || | | |||| ||||||| || ||| Sbjct 69404 ACAAGGCCATTGGAGACTCCGCCGGTACCAGCAATGTGGGATCCAGTGGCACGGATGTTG 69345 Query 72289 CTA--ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 72346 | |||| || || || || || || || ||||| ||||||| | || || | Sbjct 69344 TGAACATTG--AGCCCAATGCCGCCGGCTGACTTTGAGATCTTTGCGCATTGCTTCAATG 69287 Query 72347 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 72406 | || | ||||| || || || |||||| ||| | || | || ||| ||||| | Sbjct 69286 TGTCGAAAATGCCATCGATGCTGTCATCCGACATAGTTAGCAAGAAGCAGGACGACATCT 69227 Query 72407 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 72466 | | ||| || |||||||| || | || || | || || || ||||| || | Sbjct 69226 GAGGCCGAGGGGTACCCGCATTGAACAGAGTGGGCGTGGCATGGGTGAACCAGCGCTCGG 69167 Query 72467 ACAGTAGATTGTACGTCTCAA 72487 ||| |||||||| |||| || Sbjct 69166 ACATGAGATTGTAGGTCTGAA 69146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671131314114400