Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq97 174 2e-38 >seq97 Length=72787 Score = 174 bits (192), Expect = 2e-38 Identities = 630/974 (65%), Gaps = 29/974 (3%) Strand=Plus/Minus Query 62724 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62783 || || || || |||||||| || | ||| | ||| || || ||||||| || || | Sbjct 70106 CCCTGGACGCCGATACCGATGGGACGATGGCGCTTGTTCGACTTTTCAGCCTCCGGGACG 70047 Query 62784 GGATAATAATTAATATCTATAATTTTATTGAGATTTCT----GACAATTACTTTGACCAC 62839 || ||||| || || || || || || || | | |||| |||| | ||| | || Sbjct 70046 GGGTAATAGTTGATGTCGATGATCTTGTTCA-AGTTCTTGGTGACAGT--CTTCGTG-AC 69991 Query 62840 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT-------ACAAACATGTTCAAGG 62892 | |||||| ||| ||||| ||| || | || || || |||||| | Sbjct 69990 AGCCTTCAACTTGTTGAAATCGAATT---CA-CGGTTGGGGCCGACGAAGCGGTTCAACG 69935 Query 62893 CAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAG 62952 | | || |||||||| || ||||| ||||||| || | |||| | || || | Sbjct 69934 CGATCGACGCCAGATTGCAGACGGCGACCTCATCAGGGGCGCTGTATTCGACGATTTCGG 69875 Query 62953 TGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 63012 |||| || || || || ||||| ||||| | || || || || ||||| ||| || | Sbjct 69874 TGCACAGGTTGCTGCATTTGATCGTTCCGAGGTTCTGCTGGTTGCTCTTACGGTTGCAGG 69815 Query 63013 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 63072 | || || ||||| ||| | || || |||||||| | |||| || || |||| Sbjct 69814 CGTCTTTGTAAAGCATGTAGGGGGTGCCAGTTTCGACTTGAGCGCTGATGATGTGCTTCC 69755 Query 63073 AGACGACTCGAGCCTTTATTATAGATTT--GTATCTCCTTTCTCTTTCGTATAGTGTATA 63130 ||| | |||||||| || | ||| | | | | | || |||||| || || Sbjct 69754 AGAGATCGCGAGCCTTGATCT--GCTTTCGGAAACGCTTCTCCGACTCGTATTTCGTGTA 69697 Query 63131 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACAT 63190 | ||||||| || ||||| | || | || || || || | || ||||| Sbjct 69696 GAGCTCCTCGAACTTCTCGCCCCAGCAGTCCTCAAGACCGGGGCACTCGTGGGGGCACAT 69637 Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250 || ||||| ||||| | ||| || ||||| || ||||| || ||||| ||||| Sbjct 69636 CAGAGACCAGGTGCCGTCGGTTTCCACGCGCTTCATGAAAAGATCGGGGATCCAGAGAGC 69577 Query 63251 TATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 63309 ||| || ||||| | || | | |||||| || |||||| || | ||| | || Sbjct 69576 -ATAGAAGAGATCACGGGCACGCTCTTCCTCAGCACCACGATTCTTCTTCATATCCATGA 69518 Query 63310 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 63369 | | | || || | ||||||||||| | ||| ||||| | | | ||||| || |||| Sbjct 69517 CCTCAAAGATGTCTGCGTGCCACGGTTCGAGGTAGATGGCGAAAGCGCCAGGACGCTTGT 69458 Query 63370 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 63429 |||| |||||||| | ||| | ||| ||||| || | || | | ||| || | || | Sbjct 69457 TTCCGCCCTGATCGACGTAGCGAGCAGTGTTGTTGAATACACGGAGCATCGGGACAAGGC 69398 Query 63430 CGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTA--AT 63487 | || || | || |||||| | || | | |||| ||||||| || || | || Sbjct 69397 CATTGGAGACTCCGCCGGTACCAGCAATGTGGGATCCAGTGGCACGGATGTTGTGAACAT 69338 Query 63488 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATA 63547 || || || || || || || || ||||| ||||||| | || || ||||| | Sbjct 69337 TG--AGCCCAATGCCGCCGGCTGACTTTGAGATCTTTGCGCATTGCTTCAATGTGTCGAA 69280 Query 63548 GATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63607 || || || ||||| ||||| ||| | || | || ||| ||||| || | || Sbjct 69279 AATGCCATCGATGCTGTCATCCGACATAGTTAGCAAGAAGCAGGACGACATCTGAGGCCG 69220 Query 63608 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63667 | || |||||||| || | || || | || || || ||||| || || | || Sbjct 69219 AGGGGTACCCGCATTGAACAGAGTGGGCGTGGCATGGGTGAACCAGCGCTCGGACATGAG 69160 Query 63668 ATTGTACGTCTCAA 63681 |||||| |||| || Sbjct 69159 ATTGTAGGTCTGAA 69146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622939880370400