Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq97 183 4e-41 >seq97 Length=72787 Score = 183 bits (202), Expect = 4e-41 Identities = 632/974 (65%), Gaps = 29/974 (3%) Strand=Plus/Minus Query 62579 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62638 || || || || |||||||| || | ||| | ||| || || ||||||| || || | Sbjct 70106 CCCTGGACGCCGATACCGATGGGACGATGGCGCTTGTTCGACTTTTCAGCCTCCGGGACG 70047 Query 62639 GGATAATAATTAATATCTATAATTTTATTGAGATTTCT----GACAATTACTTTGACCAC 62694 || ||||| || || || || || || || | | |||| |||| | ||| | || Sbjct 70046 GGGTAATAGTTGATGTCGATGATCTTGTTCA-AGTTCTTGGTGACAGT--CTTCGTG-AC 69991 Query 62695 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT-------ACAAACATGTTCAATG 62747 | |||||| ||| ||||| ||| || | || || || |||||| | Sbjct 69990 AGCCTTCAACTTGTTGAAATCGAATT---CA-CGGTTGGGGCCGACGAAGCGGTTCAACG 69935 Query 62748 CAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAG 62807 | | || |||||||| || ||||| ||||||| || | |||| | || || | Sbjct 69934 CGATCGACGCCAGATTGCAGACGGCGACCTCATCAGGGGCGCTGTATTCGACGATTTCGG 69875 Query 62808 TGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 62867 |||| || || || || ||||| ||||| | || || || || ||||| ||| || | Sbjct 69874 TGCACAGGTTGCTGCATTTGATCGTTCCGAGGTTCTGCTGGTTGCTCTTACGGTTGCAGG 69815 Query 62868 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 62927 | || || ||||| ||| | || || |||||||| | |||| || || |||| Sbjct 69814 CGTCTTTGTAAAGCATGTAGGGGGTGCCAGTTTCGACTTGAGCGCTGATGATGTGCTTCC 69755 Query 62928 AGACGACTCGAGCCTTTATTATAGATTT--GTATCTCTTTTCTCTTTCGTATAGTGTATA 62985 ||| | |||||||| || | ||| | | | ||| || |||||| || || Sbjct 69754 AGAGATCGCGAGCCTTGATCT--GCTTTCGGAAACGCTTCTCCGACTCGTATTTCGTGTA 69697 Query 62986 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACAT 63045 | ||||||| || ||||| | || || || || || || | || ||||| Sbjct 69696 GAGCTCCTCGAACTTCTCGCCCCAGCAGTCCTCAAGACCGGGGCACTCGTGGGGGCACAT 69637 Query 63046 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63105 || ||||| ||||| | ||| || ||||| || ||||| || ||||| ||||| Sbjct 69636 CAGAGACCAGGTGCCGTCGGTTTCCACGCGCTTCATGAAAAGATCGGGGATCCAGAGAGC 69577 Query 63106 TATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 63164 ||| || ||||| | || | | |||||| || |||||| || | ||| | || Sbjct 69576 -ATAGAAGAGATCACGGGCACGCTCTTCCTCAGCACCACGATTCTTCTTCATATCCATGA 69518 Query 63165 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 63224 | | | || || | ||||||||||| | ||| ||||| | | | ||||| || |||| Sbjct 69517 CCTCAAAGATGTCTGCGTGCCACGGTTCGAGGTAGATGGCGAAAGCGCCAGGACGCTTGT 69458 Query 63225 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 63284 |||| |||||||| | ||| | ||| ||||| || | || | | ||| || | || | Sbjct 69457 TTCCGCCCTGATCGACGTAGCGAGCAGTGTTGTTGAATACACGGAGCATCGGGACAAGGC 69398 Query 63285 CATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTA--AT 63342 ||||||| || ||| || | || | | |||| ||||||| || || | || Sbjct 69397 CATTGGAGACTCCGCCGGTACCAGCAATGTGGGATCCAGTGGCACGGATGTTGTGAACAT 69338 Query 63343 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 63402 || || || || || || || || ||||| ||||||| | || || || || | Sbjct 69337 TG--AGCCCAATGCCGCCGGCTGACTTTGAGATCTTTGCGCATTGCTTCAATGTGTCGAA 69280 Query 63403 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63462 ||||| || || || |||||| ||| | || | || ||| ||||| || | || Sbjct 69279 AATGCCATCGATGCTGTCATCCGACATAGTTAGCAAGAAGCAGGACGACATCTGAGGCCG 69220 Query 63463 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAG 63522 | || |||||||| || | || || | || || || ||||| || || | || Sbjct 69219 AGGGGTACCCGCATTGAACAGAGTGGGCGTGGCATGGGTGAACCAGCGCTCGGACATGAG 69160 Query 63523 ATTGTACGTCTCAA 63536 |||||| |||| || Sbjct 69159 ATTGTAGGTCTGAA 69146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633624554824000