Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq810 96.9 7e-15 seq934 95.1 2e-14 seq927 95.1 2e-14 seq875 95.1 2e-14 seq859 95.1 2e-14 seq823 95.1 2e-14 seq666 95.1 2e-14 seq638 95.1 2e-14 seq613 95.1 2e-14 seq587 95.1 2e-14 seq512 95.1 2e-14 seq465 95.1 2e-14 seq276 87.8 4e-12 >seq810 Length=289286 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| ||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 112000 AGCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 111941 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 111940 CCCCGCATCGGGC 111928 >seq934 Length=502485 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 101592 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 101533 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 101532 CCCGCATCGGGC 101521 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 229805 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 229746 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 229745 CCCGCATCGGGC 229734 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 282290 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 282231 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 282230 CCCGCATCGGGC 282219 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || ||| ||||||||||||||||||||| | ||||||||||||| | |||| ||||||| Sbjct 283859 ATCGCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCG 283800 Query 142561 AGCCCCACATCGGGC 142575 |||||| |||||||| Sbjct 283799 AGCCCCGCATCGGGC 283785 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 285453 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 285394 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 285393 CCCGCATCGGGC 285382 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || ||| ||||||||||||||||||||| | ||||||||||||| | |||| ||||||| Sbjct 314690 ATCGCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCG 314631 Query 142561 AGCCCCACATCGGGC 142575 |||||| |||||||| Sbjct 314630 AGCCCCGCATCGGGC 314616 >seq927 Length=651347 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 537183 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 537124 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 537123 CCCGCATCGGGC 537112 >seq875 Length=126609 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 48325 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 48266 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 48265 CCCGCATCGGGC 48254 >seq859 Length=238021 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 42978 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 43037 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 43038 CCCGCATCGGGC 43049 >seq823 Length=2280433 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || ||| ||||||||||||||||||||| | ||||||||||||| | |||| ||||||| Sbjct 723668 ATCGCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCG 723727 Query 142561 AGCCCCACATCGGGC 142575 |||||| |||||||| Sbjct 723728 AGCCCCGCATCGGGC 723742 >seq666 Length=132689 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 34423 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 34482 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 34483 CCCGCATCGGGC 34494 >seq638 Length=192670 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 88135 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 88076 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 88075 CCCGCATCGGGC 88064 >seq613 Length=513492 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 145166 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 145225 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 145226 CCCGCATCGGGC 145237 >seq587 Length=72184 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 57087 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 57146 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 57147 CCCGCATCGGGC 57158 >seq512 Length=257938 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || ||| ||||||||||||||||||||| | ||||||||||||| | |||| ||||||| Sbjct 88860 ATTGCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCG 88801 Query 142561 AGCCCCACATCGGGC 142575 |||||| |||||||| Sbjct 88800 AGCCCCGCATCGGGC 88786 >seq465 Length=123914 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 40798 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 40739 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 40738 CCCGCATCGGGC 40727 >seq276 Length=10790 Score = 87.8 bits (96), Expect = 4e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCG-CTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||| ||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 2130 GCCTGGTTAGCTCAGTCGGTAGAGCCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 2071 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 2070 CCCCGCATCGGGC 2058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027824420990540