Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq394 131 1e-25 seq806 129 5e-25 >seq394 Length=505719 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 |||||||| ||||| |||||||| ||||| | || || ||||||||| || || || Sbjct 8550 GTAGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCTTCAAGCTGCTTGCCG 8609 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| ||||| || ||||| || ||||||||||| ||||| ||||| || Sbjct 8610 GCGAAGATAAGACGTTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTG 8669 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||||| ||||||| || |||||| || | ||| | ||| |||||||| || || Sbjct 8670 ACGTTTTCAATGGTGTCGCTGCCTTCGACTTCGAGGGTAATCGTCTTGCCGGTGAGGGTC 8729 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 8730 TTGACGAAGATTTGCAT 8746 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | ||| | || || || || || |||||||| ||| Sbjct 9201 ATACCGCCACGAAGACGGAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 9260 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | || ||| ||||||||| || || || ||| |||||||||| || ||||| || Sbjct 9261 CTGAGGGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGG 9320 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| || | | || | |||||||| | |||| Sbjct 9321 GGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAGCCTTCG 9380 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || ||||| |||| || || || || ||||||||| Sbjct 9381 ACTTCCAAAGTGATAGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCATG 9431 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || |||||||| ||| | ||||| ||| || || || || ||| Sbjct 9974 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCA 10033 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | |||||| || ||||| ||||||||||| || || ||||| || Sbjct 10034 GCGAAGATCAAACGCTGCTGATCCGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTG 10093 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | |||||||| | || || || | ||| | || || || ||||| || Sbjct 10094 ACATTTTCGATGGTGTCGGAGCCCTCAACCTCGAGGGTGATGGTCTTTCCCGTCAGGGTC 10153 Query 114366 TTTACAAAAATCTGCATG 114383 || || || || |||||| Sbjct 10154 TTGACGAAGATTTGCATG 10171 >seq806 Length=689343 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || |||| | ||| || || | |||||||| || || |||||||||||| Sbjct 392405 ATGCCACCGCGAAGTCGGAGAACCAAGTGGAGGGTAGATTCCTTCTGGATGTTGTAATCG 392464 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || ||| || || || || || ||| |||| ||||| || ||||||||| Sbjct 392465 CTCAATGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGCTGGTCCGGA 392524 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| || || |||||| || | | ||| | ||||||| || ||| Sbjct 392525 GGGATGCCTTCCTTATCTTGAATCTTAGCCTTGACGTTTTCGATGGTGTCGCTGCCTTCA 392584 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || || ||||| || || || ||||| ||||||||| Sbjct 392585 ACTTCGAGGGTGATAGTCTTTCCGGTAAGGGTCTTGACAAAGATCTGCATG 392635 Score = 129 bits (142), Expect = 5e-25 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | ||| ||||| || || |||||||| ||| | |||||| |||||| Sbjct 392653 AACGAGATGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCTTC 392712 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 ||| || || || ||| ||||||||||||| |||||||| ||||||||||| ||||| Sbjct 392713 AAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTG 392772 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || | | |||| |||||| || ||| || || | ||| | || || Sbjct 392773 GATCTTGGCCTTGACATTCTCAATAGTGTCGCTGCCTTCAACCTCGAGGGTGATGGTCTT 392832 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 ||| || || || || ||||| ||||||||| Sbjct 392833 GCCAGTGAGGGTCTTCACAAAGATCTGCATG 392863 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| |||| | || || || | ||||| || || || |||||||| || | Sbjct 391722 TACCTCCACGGAGTCGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAC 391781 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 ||| || || ||| || || || || || || ||||||||||||| || || || | Sbjct 391782 TCAATGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGG 391841 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 |||||||||| ||||| ||||| ||| | | || | ||||||| || ||| | Sbjct 391842 GAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCGATGGTGTCGCTGCCTTCAA 391901 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 | |||| ||| | ||| ||||| || || || || || || ||||||||| Sbjct 391902 CTTCCAGGGTGATCGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATG 391951 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || | ||| | || ||||| || || |||||||| ||| Sbjct 391949 ATGCCACCACGGAGACGGAGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCG 392008 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||||||||| || || || ||| |||| | ||||||||||| || Sbjct 392009 GAGAGGGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCTGGG 392068 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || ||||||| || | | || | |||||| | ||| Sbjct 392069 GGAATGCCTTCCTTATCTTGAATCTTTGCCTTGACGTTCTCGATGGTGTCTGATCCTTCA 392128 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || ||||| |||| |||||| || || ||||||||| Sbjct 392129 ACTTCGAGGGTGATAGTCTTGCCAGTCAAAGTTTTCACGAAGATCTGCATG 392179 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || ||||| || | ||| | || || || | |||||||| || ||||||||||| ||| Sbjct 392177 ATGCCGCCGCGCAATCTGAGGACCAAGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCG 392236 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||||||| || || || ||| ||||||||||||| || || || Sbjct 392237 GAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGG 392296 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||| || | | |||| |||||| | || Sbjct 392297 GGAATACCTTCCTTGTCTTGAATCTTAGCCTTGACGTTCTCAATGGTGTCTGAACCCTCA 392356 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || || ||||| || || || || || ||||||||| Sbjct 392357 ACTTCAAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGCATG 392407 Score = 102 bits (112), Expect = 7e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 114240 TTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTT 114299 ||||||||| ||||||||||||| || |||||||| |||||||| ||||| ||||| Sbjct 393006 TTACCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTG 393065 Query 114300 TGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTC 114359 || | | ||||| |||||| | | ||| || || | ||| | || |||||||| Sbjct 393066 GCCTTGACATTTTCAATGGTGTCTGAGCCTTCAACCTCAAGGGTGATGGTCTTGCCGGTA 393125 Query 114360 AGAGTTTTTACAAAAATCTGCATG 114383 ||||| || || || ||||||||| Sbjct 393126 AGAGTCTTGACGAAGATCTGCATG 393149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420129586835280