Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq806 100 1e-15 >seq806 Length=689343 Score = 100 bits (110), Expect = 1e-15 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| ||||||| || ||||| || || || |||||| ||| Sbjct 392178 ATGCAGATCTTCGTGAAAACTTTGACTGGCAAGACTATCACCCTCGAAGTTGAAGGATCA 392119 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || ||| ||||||||||||||||| ||||| || || ||| Sbjct 392118 GACACCATCGAGAACGTCAAGGCAAAGATTCAAGATAAGGAAGGCATTCCCCCAGACCAA 392059 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207 || || || || ||| | || || || ||||||||||| Sbjct 392058 CAGCGCTTGATCTTCGCCGGAAAGCAGCTTGAAGATGG 392021 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || || ||||| ||||| || Sbjct 392406 ATGCAGATCTTCGTCAAGACCCTTACCGGAAAGACCATCACCCTTGAAGTTGAGGGTTCA 392347 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || |||||||| |||||||| ||||| || ||||| Sbjct 392346 GACACCATTGAGAACGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCCCCAGATCAG 392287 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || ||||||||||| | || | | || || || Sbjct 392286 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTACAAC 392227 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || || ||||| || Sbjct 392226 ATTCAGAAGGAATCTACCCTCCACTTGGT 392198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975694604941520