Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq918 100 2e-15 seq759 86.0 5e-11 >seq918 Length=262414 Score = 100 bits (110), Expect = 2e-15 Identities = 273/411 (66%), Gaps = 8/411 (2%) Strand=Plus/Minus Query 517419 CAGTTTGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTG 517477 ||| ||| ||||| | || || ||||| | |||| || | || ||||| || ||| Sbjct 62799 CAGGTTGGTTATCGGCGTATGTGGTAAA-AGTCTGTGACGTCTTGGTGGGAATGGTGGTG 62741 Query 517478 TTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGA 517537 || | | ||| || |||||| ||||| || || || | || |||||||| || Sbjct 62740 TTCCGTTTAATGATTCGGGTCATGGCGCCACCAGCGGTCTCAATGCCGAGAGAAAGTGGG 62681 Query 517538 GTGACATCAACTAGGACAATA--TTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAG 517595 || ||||| | | |||| | || || | | |||| ||| ||| ||| || | Sbjct 62680 GTAACATCGAGCA--ACAACAGGTTCTGGACGTATTCAGATTTTTCACCGGAAAGGATGG 62623 Query 517596 CTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTT 517655 | ||||| ||||||||||| || ||||| || |||||||| | | | | || |||| Sbjct 62622 CAGCTTGGATAGCAGCACCGTAGGCAACGGCCTCATCAGGGTCGATGGACTTGTTGAGTT 62563 Query 517656 TTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCT 517714 ||| || |||||| | |||||||||| ||| | ||| |||||||| | || ||| Sbjct 62562 CTTTGCCGGAGAAAAACTCGGAAAGAAGTT-TCTGAAGCTTCGGAATACGGGTGGAACCT 62504 Query 517715 CCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTT 517774 || | | ||||| || || | ||| ||| |||| || | ||| | || || Sbjct 62503 CCGATGAGAACAATGTCGTGAATCTGCTTTTTGTCCATCTTGGCATCACGAAGGGCTCTT 62444 Query 517775 TCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAAT 517825 ||||| || || | || |||| ||| || |||||||| |||||| Sbjct 62443 TCAACAGGGTCCAAACAGTTAAGGAACAGGTCCGAGCAAAGTTCCTCGAAT 62393 >seq759 Length=207608 Score = 86.0 bits (94), Expect = 5e-11 Identities = 164/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 517588 AAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTC 517647 ||| || || ||||| ||||||||||| | ||||| ||||| ||||| || | | || Sbjct 203012 AAGGATGGCAGCTTGGATAGCAGCACCGTGGGCAACGGCTTCGTCAGGGTTGATGGATTT 203071 Query 517648 ATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAG 517706 || |||| ||| || |||||| | ||||||||||| ||| | ||| |||||||||| Sbjct 203072 GTTGAGTTCTTTGCCGGAGAAAAACTCTGAAAGAAGTT-TCTGAAGCTTCGGAATACGAG 203130 Query 517707 ATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATA 517766 || || || | | |||| || || | ||| ||| |||| || | ||| | Sbjct 203131 TGGAGCCGCCGATCAGAACAACGTCGTGGATCTGCTTTTTGTCCATCTTGGCATCACGAA 203190 Query 517767 AAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAAT 517825 || ||||||| || || | || |||| ||| || |||||||| |||||| Sbjct 203191 GGGCTCTTTCAACAGGGTCCAAACAGTTAAGGAACAGGTCCGAGCAAAGTTCCTCGAAT 203249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780775754103640