Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq97 210 3e-49 seq594 122 1e-22 seq319 87.8 2e-12 seq491 86.0 8e-12 >seq97 Length=72787 Score = 210 bits (232), Expect = 3e-49 Identities = 986/1546 (64%), Gaps = 50/1546 (3%) Strand=Plus/Plus Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763 ||||| ||| || || || || || ||||| || ||||| || | || || ||||| Sbjct 69177 GTTCACCCATGCCACGCCCACTCTGTTCAATGCGGGTACCCCTCGGCCTCAGATGTCGTC 69236 Query 111764 TTGTTTCCTTATTGCAAACAAGGA-GGATT-CA--ATCAATGGCATTTACGGCACTCTCA 111819 || ||| |||| ||| | | |||| || ||| ||||||||| || ||| | | Sbjct 69237 CTGCTTC----TTGCTAACTATGTCGGATGACAGCATCGATGGCATTTTCGACACATTGA 69292 Query 111820 CTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCA 111879 |||| || | |||||||||| || || || || ||| | | | || | || Sbjct 69293 AGCAATGCGCAAAGATCTCAAAGTCAGCCGGCGGCATTGGGCTCAATGTTCACAACATCC 69352 Query 111880 GAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGC 111939 | |||| || | ||| ||||| || || |||| || | || |||| Sbjct 69353 GTGCCACTGGATCCCACATTGCTGGTACCGGCGGAGTCTCCAATGGCCTTGTCCCGATGC 69412 Query 111940 TTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGG 111993 | || ||||| ||| ||| || ||||| || | || | || ||||| | Sbjct 69413 TCCGTGTATTCAACAACACTGCTCGCTACGTCGATCAGGGCGGAAACAAGCGTCCT---G 69469 Query 111994 GATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGC 112053 | || |||| |||| || || || |||||||| || ||| | ||| || | || || Sbjct 69470 GCGCTTTCGCCATCTACCTCGAACCGTGGCACGCAGACATCTTTGAGGTCATGGATATGA 69529 Query 112054 GTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTC 112113 || | |||| |||||| | ||| ||| |||||||||| ||||||||||| | Sbjct 69530 AGAAGAATCGTGGTGCTGAGGAAGAGCGTGCCCGTGATCTCTTCTATGCTCTCTGGATCC 69589 Query 112114 CAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA 112173 | ||||| ||||||||| | || || |||| |||||||| | || || || Sbjct 69590 CCGATCTTTTCATGAAGCGCGTGGAAACCGACGGCACCTGGTCTCTGATGTGCCCCCACG 69649 Query 112174 AGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTAC 112232 || |||||||| || ||| | ||| ||| |||| || | |||||||| || ||| Sbjct 69650 AGTGCCCCGGTCTTGAGGACTGCTG-GGGCGAGAAGTTCGAGGAGCTCTACACGAAATAC 69708 Query 112233 GAG--GAAGAAAGTCGGGCGACTGCGA---CGGTGCCA-GCTGCCGATGTGTGGAAAGCT 112286 ||| | |||| ||| | ||| | | | | ||| |||| | ||||| Sbjct 69709 GAGTCGGAGAA------GCGTTTCCGAAAGCAGATCAAGGCTCGCGATCTCTGGAAGCAC 69762 Query 112287 ATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAAC 112346 || ||| ||||| ||| ||||| || || || |||||||||||||||||||| ||| Sbjct 69763 ATCATCAGCGCTCAAGTCGAAACTGGCACCCCCTACATGCTTTACAAAGACGCCTGCAAC 69822 Query 112347 CAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATC 112406 | ||||| || || |||| | || |||||| | |||||| || || |||||| Sbjct 69823 CGTAAGAGCAACCAGCAGAACCTCGGAACGATCAAATGCAGCAACCTGTGCACCGAAATC 69882 Query 112407 TTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCC 112466 | |||| | | | |||||| || || || || || || || ||||| | | Sbjct 69883 GTCGAATACAGCGCCCCTGATGAGGTCGCCGTCTGCAATCTGGCGTCGATCGCGTTGAAC 69942 Query 112467 AAGTATGT-GGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAA 112525 | || || ||| || || ||| |||| | || | | | || ||||| Sbjct 69943 CGCTTCGTCGGCCCCA---ACCGTGA-ATTCGATTTCAACAAGTTGAAGGCTGTCACGAA 69998 Query 112526 AACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGC 112585 |||||||| || ||| | |||| | || || | || | ||||||||| | || Sbjct 69999 GACTGTCACCAAGAACTTGAACAAGATCATCGACATCAACTATTACCCCGTCCCGGAGGC 70058 Query 112586 TCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGT 112645 | || || || | | | || ||||| || ||| |||| ||||| || ||||| |||| Sbjct 70059 TGAAAAGTCGAACAAGCGCCATCGTCCCATCGGTATCGGCGTCCAGGGCCTCGCTGATGC 70118 Query 112646 ATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGG--AAATCAATGCGCGT 112703 ||| || || | |||| |||||| | ||| | | | || || Sbjct 70119 CTTCCAACTCATGCGACTTCCATTCACTTCCGA--AGGCGCACGTCTGTTGAACAAGCAG 70176 Query 112704 ATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGAT 112763 || || ||||| || || | | || ||||| ||| |||| ||||| | Sbjct 70177 ATCTTCGAGACTATCCATTATGGTGCCCTTGAAGCGTCGGCGGAATTGGCCGGCACCCTA 70236 Query 112764 GGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATAT 112822 || ||||| ||||||| ||| || ||||| | || |||||| | || ||| || || Sbjct 70237 GGCCCATACGAAACCTATGAAGGCTCTCCGGTGTC-CAAGGGCATTCTGCAACACGACAT 70295 Query 112823 GTGGGAAGGTGA----GACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCA 112878 || |||| |||| |||||| || | ||||||| | | || ||||| ||||| Sbjct 70296 GT-GGAATGTGACCCCGACCAACCT---GTGGGACTGGGCCCCGCTTCGGGAACTCATCA 70351 Query 112879 AGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCAC 112938 || |||| ||| |||| ||| || | | || || ||||| || ||||||||||| | Sbjct 70352 AGAAGAACGGTGTTCGCAACTCGCTCCTCGTCGCCCCTATGCCGACGGCCTCCACCGCGC 70411 Query 112939 AAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAA 112998 | || | || || ||||||| | | || |||||| || ||| |||| | | Sbjct 70412 AGATTCTCGGAAACAATGAATCCATCGAGCCCTACCGCACCAACGTCTACACTCGTGGTG 70471 Query 112999 CCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTG 113058 ||| | || || || || ||| ||||| || | || ||| ||| | Sbjct 70472 TCCTTTCCGGTACTTTCCAAATCGTGAACCCCCATCTGTTGAACGATCTCGTCGAGCGTA 70531 Query 113059 GTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATA 113118 ||||||| | | ||| | ||| | | | || | | |||| ||| ||||||| | Sbjct 70532 ATCTCTGGAACGACGATGTCAAGAACCACTTGCTCGCTGGCAGTGGCTCCGTTCAAAACA 70591 Query 113119 TTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGA 113178 | | || || ||||| | ||| || | ||| || || |||||||||| || Sbjct 70592 TCCCCGGCATCCCGGATGACGTCAAGGAGATCTACAAGACCGTCTGGGAAATCAGTCAGA 70651 Query 113179 AGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCA 113224 |||| |||| | |||||||| |||||||| |||||||||||| Sbjct 70652 AGGACATCATCCAGATGGCCGCCGATCGTGGCGCCTTCATTGATCA 70697 >seq594 Length=51185 Score = 122 bits (134), Expect = 1e-22 Identities = 366/561 (65%), Gaps = 7/561 (1%) Strand=Plus/Minus Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 ||| ||||| | | ||| || |||||||| ||||| ||||||||| | || | || Sbjct 46430 CCGTGATCTGTCATACGCCCTGTGGATTCCCGATCTTTTCATGAAGCGCGTCCAAACGAA 46371 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 ||| || ||||| || | || ||| || | || || || ||| | |||||| Sbjct 46370 TGGTAAGTGGTCGCTTATGTGCCCACACGAATGTCCAGGGCTTGAGGATTGCTGGGGTGA 46311 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG--GGCGACTGCGACGGTG 112262 | ||||||||||||||||||| || ||||| |||| || || | | | ||| Sbjct 46310 GAAGTTTGAAGCCCTCTACACCAAATACGAATCCGAAAAGCGTTATCGTCGTCAA--GTG 46253 Query 112263 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 | ||| |||| ||||||| |||| || |||||| ||| ||||| || ||||| Sbjct 46252 CGTGCTTGCGATCTGTGGAACCATATTGTCGGCGCTCAAATCGAAACTGGCACGCCATAC 46193 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||| | |||||||| ||||| || | ||||| || || ||||| | || ||||| Sbjct 46192 ATGGTCTACAAAGATGCCTGCAATCGTAAGAGCAACCAGCAGAATCTCGGAACTATCAAA 46133 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 | || | || |||| |||| | |||| | | | ||||| || || || | Sbjct 46132 GGCAGCAGTGTGTGCACAGGAATCGTTGAATACAGTGCCTCTGATGAAACCGCAGTCTCC 46073 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTAT 112502 || || ||||| ||||| || | | || || || || | || ||| |||| Sbjct 46072 AATCTGGCATCGATCGCGCTGAACCGCTTCGTCGACCC--CAACCATGA-ATTCGATTTC 46016 Query 112503 GAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGA 112562 | || | | | || ||||| || ||||| || ||| | |||| | ||||||| Sbjct 46015 AACAAGTTGAAAGCCGTCACGAAGACAGTCACCAAGAACTTGAACAAGATCATTGATATC 45956 Query 112563 AATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 112622 || | ||||||||| | ||| || || || | | | || || || || || || Sbjct 45955 AACTACTACCCCGTTCCGGAAGCTGAAAAGTCGAACAAGCGCCATCGACCCATCAGTATC 45896 Query 112623 GGTGTCCAAGGTCTCGCGGAT 112643 ||||| || || || || ||| Sbjct 45895 GGTGTTCAGGGCCTGGCTGAT 45875 >seq319 Length=516904 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| | || || || |||| || || || ||||| ||||||||| || ||| Sbjct 271994 TCCTTCGGCGAACGGGTCATCGCTTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGGTCC 271935 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 ||| || || | ||||||||| | || ||||||||||| ||||| | |||||| Sbjct 271934 TTCGCAGCCATCTTCTGGCTCAAGGAACGCGGTCTCATGCCCGGTCTGACCCACTCCAAT 271875 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||| ||||| ||||| || || | || ||||| Sbjct 271874 GAGCTCATCTCCCGTGATGAGGGCCTTCATCGCGACTTTGC 271834 >seq491 Length=111361 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 176894 TCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACC 176953 ||||| |||||| ||| |||||||| ||||||||||| ||| |||||||||| | Sbjct 65732 TCACGCACATTCAACGGCTTACCACGAAGCGGGAAGACACCATAGCGATCGCGACCGATG 65673 Query 176954 ACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTA 177013 ||||| || || || || ||||| || || || || || || || |||| ||| || || Sbjct 65672 ACAGACAGGCCTGCGACGGCGAGGGTCTTGGCGGAGTCTCCTTCGGTCAGGATTAGCGTG 65613 Query 177014 CA 177015 || Sbjct 65612 CA 65611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620735106276800