Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq97 174 2e-38 seq585 145 9e-30 >seq97 Length=72787 Score = 174 bits (192), Expect = 2e-38 Identities = 996/1576 (63%), Gaps = 66/1576 (4%) Strand=Plus/Minus Query 109497 CAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGAT 109556 ||| |||| ||| || |||||||| ||||| |||||||| || ||||| | |||||| Sbjct 70716 CAAATTCAACGATTGCGACTGATCAATGAAGGCGCCACGATCGGCGGCCATCTGGATGAT 70657 Query 109557 ACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTC 109616 ||| || || ||||||||||| |||||||| | | ||||| ||||| || ||| | Sbjct 70656 GTCCTTCTGACTGATTTCCCAGACGGTCTTGTAGATCTCCTTGACGTCATCCGGGATGCC 70597 Query 109617 CACGATGTTTTGAATAGAGCCACCAGCCTTC-ACCATGAGATCCTT--CATC-TCTTTCG 109672 ||||||||||| |||||| | ||| | | || | | | ||| |||| || || Sbjct 70596 GGGGATGTTTTGAACGGAGCCA-CTGCCAGCGAGCAAGTGGTTCTTGACATCGTCGTT-- 70540 Query 109673 ACCAGAGACCGACCTTTTTGAGATCG-TCAACAAGATGCTTGTTGACCACGA----CAAA 109727 ||||||| || ||||||| ||||| ||||| ||| ||||| ||| Sbjct 70539 -CCAGAGATTACGCTCGACGAGATCGTTCAAC-AGATGGGGGTT---CACGATTTGGAAA 70485 Query 109728 TTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATT 109787 | ||| | ||| | || ||||| ||| || |||||| |||| | ||||| Sbjct 70484 GT-ACCGGAAAGGACACCACGAGTGTAGACGTTGGTGCGGTAGGGCTCGATGGATTCATT 70426 Query 109788 GTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCG 109847 ||| || || || || || ||||| || || ||||| || || | ||| || ||| || Sbjct 70425 GTTTCCGAGAATCTGCGCGGTGGAGGCCGTCGGCATAGGGGCGACGAGGAGCGAGTTGCG 70366 Query 109848 GAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTT 109907 | ||| ||| |||| | | || || | | | |||| || |||| | || Sbjct 70365 AACACCGTTCTTCTTGATGAGTTCCCGAAGCGGGGCCCAGTC-------CCAC--AGGTT 70315 Query 109908 AGTC----TCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCT 109963 ||| ||| ||| |||||| || |||| || | |||| | | ||||| || | Sbjct 70314 GGTCGGGGTCA-CATTCCACATGTCGTGTTGCAGAATGCCCTTGGACACCGGAGAGCCTT 70256 Query 109964 TGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCAT 110023 | | ||||| | || ||||||| || | || || || || || ||| Sbjct 70255 CATAGGTTTCGTATGGGCCTAGGGTGCCGGCCAATTCCGCCGACGCTTCAAGGGCACCAT 70196 Query 110024 GATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA 110083 || |||||||| || || || |||| || || | |||| | ||| |||| Sbjct 70195 AATGGATAGTCTCGAAGATCTGCTTGTTCAACAGACGTGCGCCTTCGGAAGTGAATGGAA 70136 Query 110084 GACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCT 110143 | | || || |||| || || ||||| || |||| ||| ||||| ||||| Sbjct 70135 GTCGCATGAGTTGGAAGGCATCAGCGAGGCCCTGGACGCCGATACCGATGGGACGATGGC 70076 Query 110144 TCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGA 110203 | |||| || | ||| ||||||||| ||||| |||||||| | || | Sbjct 70075 GCTTGTTCGACTTTTCAGCCTCCGGGACGGGGTAATAGTTGATGTCGATGATCTTGTTCA 70016 Query 110204 GATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGA----ACGTTTTC 110259 ||||| || ||||||||||||| | | | |||| | |||||| ||| || Sbjct 70015 AGTTCTTGGTGACAGTCTTCGTGACAGCCTTCAACTTGTTGAAATCGAATTCACGGTTGG 69956 Query 110260 GTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCG 110319 | | ||| | | | || || ||||| |||||||| || | ||| Sbjct 69955 GGC-------CGACGAAGCGGTTCAACGCGATCGACGCCAGATTGCAGACGGCGACCTCA 69903 Query 110320 TCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAG 110379 || | || ||||||| | ||||| || |||| |||| | || || || | | Sbjct 69902 TCAGGGGCGCTGTATTCGACGATTTCGGTGCACAGGTTGCTGCATTTGATCGTTCCGAGG 69843 Query 110380 TTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTT 110439 |||| ||| || || |||||| || || || || |||||||| ||||| |||||| Sbjct 69842 TTCTGCTGGTTGCTCTTACGGTTGCAGGCGTCTTTGTAAAGCATGTAGGGGGTGCCAGTT 69783 Query 110440 TCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCG 110499 || || | ||| ||| |||||| | |||| || | | ||| || | | Sbjct 69782 TCGACTTGAGCGCTGATGATGTGCTTCCAGAGATCGCGAGCCTTG--ATCTGCTTTCG-G 69726 Query 110500 AGAC-CT--TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCA 110556 | || || ||| |||||| || ||||| | ||||| || | || || | || Sbjct 69725 AAACGCTTCTCCGACTCGTATTTCGTGTAGAGCTCCTCGAACTTCTCGCCCCAGCAGTCC 69666 Query 110557 GAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTC 110616 |||||| || || ||| || | || ||||| | || | || || | | Sbjct 69665 TCAAGACCGGGGCACTCGTGGGGGCACATCAGAGACCAGGTGCCGTCGGTTTCCACGCGC 69606 Query 110617 TTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCA 110676 |||||||| || || || ||||| | || |||| || |||||| ||| | || ||| Sbjct 69605 TTCATGAAAAGATCGGGGATCCAGAGAGCATAGAAGAGATCACGGGCACGCTCTTCCTCA 69546 Query 110677 TCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGA 110736 |||| | || | |||| | || | ||| || | |||||| |||||||| Sbjct 69545 GCACCACGATTCTTCTTCATATCCATGACCTCAAAGATGTCTGCGTGCCACGGTTCGAGG 69486 Query 110737 TAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTG 110790 |||| |||| | || | |||| || |||| | || ||||| || ||| Sbjct 69485 TAGATGGCGAAAGCGCC---AGGACGCTTGTTTCCGCCCTGATCGACGTAGCGAGCAGTG 69429 Query 110791 GCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATT 110850 ||||| || | |||||| || | || |||| ||| || ||||| ||| Sbjct 69428 TTGTTGAATACACGGAGCATCGGGACAAGGCCATTGGAGACTCCGCCGGTACCAGCAATG 69369 Query 110851 CTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTA 110910 ||| | ||||||| |||| ||| | || | ||||| || || || |||| Sbjct 69368 TGGGATCCAGTGGCACGGATGTTGTGAACATTGAGCCCAATGCCGCCGGCTGACTTTGAG 69309 Query 110911 ATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAA---TCGAATCTG-CCTTGTT 110966 || | ||| || | | | ||| | |||| ||||| | | ||| | | | ||| Sbjct 69308 ATCTTTGCGCATTGCTTCAATGTGTCGAAAATGCCATCGATGCTGTCATCCGACATAGTT 69249 Query 110967 GGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 |||| ||||| || ||||||||||| ||||| || ||||||||||| || || || Sbjct 69248 AGCAA----GAAGCAGGACGACATCTGAGGCCGAGGGGTACCCGCATTGAACAGAGTGGG 69193 Query 111027 TGTCGCATGAATGAAC 111042 || ||||| ||||| Sbjct 69192 CGTGGCATGGGTGAAC 69177 >seq585 Length=222271 Score = 145 bits (160), Expect = 9e-30 Identities = 981/1567 (63%), Gaps = 51/1567 (3%) Strand=Plus/Plus Query 109497 CAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGAT 109556 |||||| | ||| || |||||||| ||||| |||||||| || ||||| |||||||| Sbjct 91232 CAAGTTGAGCGATTGCGACTGATCAATGAAGGCTCCACGATCGGCGGCCATCTCGATGAT 91291 Query 109557 ACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTC 109616 ||| || | || ||||||||||||||||||| | |||||| | || || ||| | Sbjct 91292 GTCCTTCTGACGGATCTCCCAGACAGTCTTGTACAGCTCCTTGATGTAGTCTGGGATGCC 91351 Query 109617 CACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCA 109676 |||||| || | ||||||| || | || | | |||||| |||| ||| Sbjct 91352 TCGGATGTTCTGCACCGAGCCACTGGCGGCGATCAGGCTGTTCTTCATGTCTTCATTCCA 91411 Query 109677 GAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGA----CAAATTCAC 109732 ||| | | || || | | |||||| || ||||| ||| | | Sbjct 91412 GAGGTTCAAATCGACAAGGTCCTTCAGCAGATGCGGATT---CACGATTTGGAAAGT-GC 91467 Query 109733 CAGCAAGTGTGCGTCGGAGGTAGATGTTAGTC-GTGTAGGGTTCGAAACACTCATTGTTG 109791 | | ||| || ||| ||| | || ||| | ||||| |||| | || |||||| Sbjct 91468 CGGAAAGGACTCGACGGGTGTACACATT-GTCGGCATAGGGCTCGATGGATTCGTTGTTG 91526 Query 109792 CCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGA 109851 || || || || || |||||||| || |||||||| || | ||| || ||| |||| | Sbjct 91527 CCGAGAATCTGCGCGGTGGAAGCCGTCGGCATGGGGGCGACGAGGAGCGAGTTGCGGACA 91586 Query 109852 CCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTC 109911 || ||| |||| | | | || | | | |||| || ||| | |||||| Sbjct 91587 CCGTTCTTCTTGATGAGTTTCCGAAGCGGGGCCCAGTC-------CCA--TAGGTTAGTC 91637 Query 109912 ----TCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGA- 109966 | ||| | |||||| || |||| || | |||| | | || | |||||| | Sbjct 91638 GGGTTGACC-TTCCACATGTCGTGTTGCAGAATGCCCTTCGACACCGG-GGACCCTTCAT 91695 Query 109967 AACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGAT 110026 | ||||||| | || | || |||||| || | || || || || || | | | Sbjct 91696 AGGTCTCGTAGGCACCATGAATACCGGCCAGTTCCGCCGACGCTTCAAGGGCACCGTAGT 91755 Query 110027 ACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC 110086 | || |||||||| || || |||| | | | |||| | |||| || || | Sbjct 91756 AGATGGTCTCAAAGATCTGCTTGTTCAGACGCCTCGCGCCTTCGGAAGCGAACGGCAGTC 91815 Query 110087 CACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCA 110146 || || |||| || || ||||| || |||| ||| ||||| ||||| | Sbjct 91816 GCATGAGTTGGAAGGCATCAGCGAGGCCCTGGACGCCGATACCGATGGGACGATGGCGCT 91875 Query 110147 TGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGAT 110206 |||| || | ||| || |||||| ||||| |||||||| | || | | Sbjct 91876 TGTTCGACTTTTCAGCCTCCGGAACAGGGTAATAGTTGATGTCGATGATCTTGTTCAAGT 91935 Query 110207 TCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGA----ACGTTTTCGTC 110262 |||| || || |||||||||| | | | |||| | |||||| ||| || | | Sbjct 91936 TCTTGGTGACGGTCTTCGTGACAGCCTTCAACTTGTTGAAATCGAATTCACGGTTGGGGC 91995 Query 110263 TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCT 110322 ||| | | | || || ||||| |||||||| || | ||| || Sbjct 91996 -------CGACGAAGCGGTTCAACGCGATCGACGCCAGATTGCAGACGGCGACCTCATCA 92048 Query 110323 TTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTC 110382 || ||||||| | || || || |||| |||| || || || || | |||| Sbjct 92049 GGCGCGCTGTATTCGACGATCTCGGTGCACAGGTTGCTACATTTGATCGTTCCGAGGTTC 92108 Query 110383 TTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCC 110442 | || || || |||||| ||||| || |||| |||||| || || || ||||| Sbjct 92109 TGTTGGTTGCTCTTACGGTTGCAGGCATCTTTGTAGACCATGTAGGGCGTGCCGGTTTCA 92168 Query 110443 GTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTG----CGTTAGC 110498 || || || |||| |||||| | || ||| |||| ||| || |||| Sbjct 92169 ACTTGAGAGCCGACAATGTGCTTCCAAAGGTCACGGGCAAGGAC--TTGACGACGGTAGC 92226 Query 110499 GAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA 110558 | ||| |||||| |||||||| | | |||||| |||| || | ||| Sbjct 92227 --GCTTTTCGGACTCGTATTTGGTGTAGAGCTGCTCAAACTCCTCGCCCCAGCAATCCTC 92284 Query 110559 AAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTT 110618 ||||| || | ||| || | |||||||| |||| | || || | ||| Sbjct 92285 GAGACCAGGACACTCATGGGGGCACATCAGGGACCAGGTTCCGTCGGTTTCGACGCGCTT 92344 Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATC 110678 |||||| || || || ||||| | || |||| ||||||||| ||| | || || | Sbjct 92345 CATGAAGAGATCGGGGATCCAGAGGGCGTAGAAGAGGTCACGGGCACGTTCTTCATCGGC 92404 Query 110679 ACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA 110738 ||| ||| || || | | || | | || | ||||| || |||||||| Sbjct 92405 ACCAGTGTTCTTCTTGAGATCGAGGACTTCGAAAACGTCGGCATGCCAGGGCTCGAGATA 92464 Query 110739 GACAGCGATGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 ||| || | || || ||| ||| | ||||| | || || || ||| ||||| Sbjct 92465 GACGGCAAAGGCACCGGGACGCTTACCGCCTTGGTTGATGTAACGAGCCGTGTTGTTGAA 92524 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 ||| | |||||| || | || || | || ||| || || | | || Sbjct 92525 GACGCGGAGCATCGGGACAAGGCCGTGCGAGATGCCACCAGTGCCAGCGACACGGGTTCC 92584 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 |||||| |||| ||||| | || || || ||||| || |||| || || | || Sbjct 92585 GGCGGCACGGATGTTGTGGACGTTGATGCCGATGCCACCAGCGGACTTGCTGATGCGAGC 92644 Query 110919 ACACTCTGTGAGTGTACCATAAATACCATCAATCGA---ATCTGCCTTGTTGGCAATTAG 110975 ||||| | || || | | || || |||| || |||| | || | ||| || Sbjct 92645 ACACTGCTTCAGGGTGTCGAAGATGCCTTCAACGGAGTCCTCTGACATG--GTCAA-CAG 92701 Query 110976 AAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 ||||| || ||||||||||| ||||| || ||||||||||| ||||| || || ||||| Sbjct 92702 GAAGCAGGACGACATCTGAGGCCGAGGGGTACCCGCATTGAACAGTGTGGGCGTGGCATG 92761 Query 111036 AATGAAC 111042 | ||||| Sbjct 92762 AGTGAAC 92768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588969079532000