Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq394 89.7 4e-13 >seq394 Length=505719 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAA-CGGAGGCTGG 107614 ||||| || || ||||| || | || ||||| || || ||| ||||| || |||| | Sbjct 9658 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAAGTCGAAGGCAG- 9600 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| ||| | | | || || ||||| ||||| ||||| | ||| ||||| Sbjct 9599 CGACACTATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCCCCAGATCA 9540 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | || || | || || || ||||| ||||| | | || || | |||||||| Sbjct 9539 GCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTACAA 9480 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| || ||||| || || | ||| |||||||||||||||| || || Sbjct 9479 CATCCAGAAGGAATCCACCCTCCACTTGGTGTTGAGATTGCGCGGTGG 9432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398872230367660