Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq918 107 1e-17 seq759 89.7 4e-12 >seq918 Length=262414 Score = 107 bits (118), Expect = 1e-17 Identities = 277/412 (67%), Gaps = 10/412 (2%) Strand=Plus/Minus Query 281586 CAGTTTGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTG 281644 ||| ||| ||||| | || || ||||| | |||| || | || ||||| || ||| Sbjct 62799 CAGGTTGGTTATCGGCGTATGTGGTAAA-AGTCTGTGACGTCTTGGTGGGAATGGTGGTG 62741 Query 281645 TTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGA 281704 || | | ||| || |||||| |||||||| || || | || |||||||| || Sbjct 62740 TTCCGTTTAATGATTCGGGTCATGGCGCCACCAGCGGTCTCAATGCCGAGAGAAAGTGGG 62681 Query 281705 GTGACATCAACTAGGACAATA--TTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAG 281762 || ||||| | | |||| | || || | | |||| ||| ||| ||| || | Sbjct 62680 GTAACATCGAGCA--ACAACAGGTTCTGGACGTATTCAGATTTTTCACCGGAAAGGATGG 62623 Query 281763 CTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTT 281822 | ||||| ||||||||||| || ||||| || |||||||| | | | | || |||| Sbjct 62622 CAGCTTGGATAGCAGCACCGTAGGCAACGGCCTCATCAGGGTCGATGGACTTGTTGAGTT 62563 Query 281823 TTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCT 281881 ||| || |||||| | |||||||||| ||| | ||| |||||||| | || ||| Sbjct 62562 CTTTGCCGGAGAAAAACTCGGAAAGAAGTT-TCTGAAGCTTCGGAATACGGGTGGAACCT 62504 Query 281882 CCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTT 281941 || | | ||||| || || | ||| ||| |||| || | ||| | || || Sbjct 62503 CCGATGAGAACAATGTCGTGAATCTGCTTTTTGTCCATCTTGGCATCACGAAGGGCTCTT 62444 Query 281942 TCAACGGGTTCAAGACCAGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAAT 281992 ||||| || || | | ||| | |||| ||| || |||||||| |||||| Sbjct 62443 TCAACAGGGTCCA-AACAGTTAAGGAACAGGTCCGAGCAAAGTTCCTCGAAT 62393 >seq759 Length=207608 Score = 89.7 bits (98), Expect = 4e-12 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 281755 AAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTC 281814 ||| || || ||||| ||||||||||| | ||||| ||||| ||||| || | | || Sbjct 203012 AAGGATGGCAGCTTGGATAGCAGCACCGTGGGCAACGGCTTCGTCAGGGTTGATGGATTT 203071 Query 281815 ATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAG 281873 || |||| ||| || |||||| | ||||||||||| ||| | ||| |||||||||| Sbjct 203072 GTTGAGTTCTTTGCCGGAGAAAAACTCTGAAAGAAGTT-TCTGAAGCTTCGGAATACGAG 203130 Query 281874 ATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATA 281933 || || || | | |||| || || | ||| ||| |||| || | ||| | Sbjct 203131 TGGAGCCGCCGATCAGAACAACGTCGTGGATCTGCTTTTTGTCCATCTTGGCATCACGAA 203190 Query 281934 AAACTTTTTCAACGGGTTCAAGACCAGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAAT 281992 || ||||||| || || | | ||| | |||| ||| || |||||||| |||||| Sbjct 203191 GGGCTCTTTCAACAGGGTCCA-AACAGTTAAGGAACAGGTCCGAGCAAAGTTCCTCGAAT 203249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740584249972440