Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq806 87.8 1e-12 seq394 82.4 5e-11 >seq806 Length=689343 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || || ||| || || |||||||| || | |||||| | || || Sbjct 391742 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAATGTGCGGCCATCCTCG 391801 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || |||||||| || | ||||||||||||| | || | ||||| ||||| Sbjct 391802 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 391861 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || |||| |||| || | ||||||||| ||| || || | |||||||| || Sbjct 391862 ATCTTGGCTTTC-ACATTCTCGATGGTGTCGCTGCCTTCAACTTCCAGGGTGATCGTCTT 391920 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||||||||| Sbjct 391921 GCCAGTAAGGGTCTTGACGAAGATCTGCAT 391950 >seq394 Length=505719 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || || | ||||| || || || || || || |||||||| ||||| Sbjct 8976 CCACCGCGCAGGCGGAGGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAC 9035 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || | || ||||| || ||||| || || ||||| |||||||| ||| | || Sbjct 9036 AAGGTACGGCCATCTTCCAACTGCTTTCCAGCGAAGATCAAGCGCTGCTGGTCTGGGGGA 9095 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| || || || || || | | | || | ||||||||| ||| || Sbjct 9096 ATACCTTCCTTATCCTGGATCTTGGCCTTGA-CGTTCTCGATGGTGTCGCTGCCTTCGAC 9154 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| || || || || | || || || |||||||||||| Sbjct 9155 CTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATA 9203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328700234284800