Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq585 120 4e-22 >seq585 Length=222271 Score = 120 bits (132), Expect = 4e-22 Identities = 462/722 (64%), Gaps = 18/722 (2%) Strand=Plus/Plus Query 69088 AATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTT 69147 || ||||| || | ||||| || || |||||||| || | ||| | ||| || || || Sbjct 91827 AAGGCATCAGCGAGGCCCTGGACGCCGATACCGATGGGACGATGGCGCTTGTTCGACTTT 91886 Query 69148 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-AAGATTTCGGACTAC 69206 ||||| || |||| ||| ||||| || || || || || || || ||| | | || || Sbjct 91887 TCAGCCTCCGGAACAGGGTAATAGTTGATGTCGATGATCTTGTTCAAGTTCTTGGTG-AC 91945 Query 69207 TACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATA---ACAAACAT 69263 || || |||| | ||| ||||| ||| | | || || Sbjct 91946 GGTCTTCGTGACAGCCTTCAACTTGTTGAAATCGAATTCACGGTTGGGGCCGACGAAGCG 92005 Query 69264 ATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTAT 69323 |||| || | || || ||||| || || || ||||||| || |||| | Sbjct 92006 GTTCAACGCGATCGACGCCAGATTGCAGACGGCGACCTCATCAGGCGCGCTGTATTCGAC 92065 Query 69324 TATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTT 69383 ||||| || || || || ||||||||||| || || || || || || || ||||| Sbjct 92066 GATCTCGGTGCACAGGTTGCTACATTTGATCGTTCCGAGGTTCTGTTGGTTGCTCTTACG 92125 Query 69384 GTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443 ||| ||||| || ||||| | || | || || || ||||||| ||||| ||| ||| Sbjct 92126 GTTGCAGGCATCTTTGTAGACCATGTAGGGCGTGCCGGTTTCAACTTGAGAGCCGACAAT 92185 Query 69444 AGATTTCCAAACGACCCTAGCA-----TTTATTACGGTCTTGTAACGCTTCTCTTTTTCA 69498 ||||||| | | | ||| || | ||| ||| ||||| || || Sbjct 92186 GTGCTTCCAAAGGTCACGGGCAAGGACTTGACGACG-----GTAGCGCTTTTCGGACTCG 92240 Query 69499 TATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCA 69558 |||| || || ||| | || || || || ||||| ||| || | |||||||| ||| Sbjct 92241 TATTTGGTGTAGAGCTGCTCAAACTCCTCGCCCCAGCAATCCTCGAGACCAGGACACTCA 92300 Query 69559 TTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGA 69618 | || ||||||| ||||| | || | || || ||||| || |||||||| Sbjct 92301 TGGGGGCACATCAGGGACCAGGTTCCGTCGGTTTCGACGCGCTTCATGAAGAGATCGGGG 92360 Query 69619 ATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttA 69678 ||||| || || ||||| || | || | | ||| || || || || || || Sbjct 92361 ATCCAGAGGGCGTAGAAGAGGTCACGGGCACGTTCTTCATCGGCACCAGTGTTCTTCTTG 92420 Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738 |||||||| | || | || || | |||||| || || ||||| | || | | | || Sbjct 92421 AGATCGAGGACTTCGAAAACGTCGGCATGCCAGGGCTCGAGATAGACGGCAAAGGCACCG 92480 Query 69739 GGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATC 69798 || || ||| || || || | ||||| | || ||||| || |||| | |||||| Sbjct 92481 GGACGCTTA---CCGCCTTGGTTGATGTAACGAGCCGTGTTGTTGAAGACGCGGAGCATC 92537 Query 69799 GG 69800 || Sbjct 92538 GG 92539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686900728821600