Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq806 102 5e-17 >seq806 Length=689343 Score = 102 bits (112), Expect = 5e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | |||||| ||| ||||| || ||||| || || || || || || Sbjct 391961 AGACGGAGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGG 392020 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||| || || ||||| || || || ||||||||||| || || | || ||| Sbjct 392021 CCATCTTCAAGCTGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCTGGGGGAATGCCTTCC 392080 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| ||| |||| || ||| | || |||||| | || ||||| | ||| Sbjct 392081 TTATCT-TGAATCTTTGCCTTGACGTTCTCGATGGTGTCTGATCCTTCAACTTCGAGGGT 392139 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || || || |||||||| || ||||||||| Sbjct 392140 GATAGTCTTGCCAGTCAAAGTTTTCACGAAGATCTGCATG 392179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725994379020