Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq97 143 4e-29 >seq97 Length=72787 Score = 143 bits (158), Expect = 4e-29 Identities = 510/791 (64%), Gaps = 12/791 (2%) Strand=Plus/Minus Query 76274 GCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCC 76333 || || || || ||||| || ||||| ||||||| || | |||| | || || Sbjct 69935 GCGATCGACGCCAGATTGCAGACGGCGACCTCATCAGGGGCGCTGTATTCGACGATTTCG 69876 Query 76334 GTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACAT 76393 ||||| || || || || ||||| ||||| || || || ||||||||||| ||| || Sbjct 69875 GTGCACAGGTTGCTGCATTTGATCGTTCCGAGGTTCTGCTGGTTGCTCTTACGGTTGCAG 69816 Query 76394 GAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTC 76453 | ||| || ||||| | | || || |||||||| | || | ||| || ||| Sbjct 69815 GCGTCTTTGTAAAGCATGTAGGGGGTGCCAGTTTCGACTTGAGCGCTGATGATGTGCTTC 69756 Query 76454 CAGACGACTCTAGCTTTTATTATAGATTT--GTATCGCTTCTCTCTTTCATATTGTGTAT 76511 |||| | | ||| || || | ||| | | |||||||| || |||| || | Sbjct 69755 CAGAGATCGCGAGCCTTGAT--CTGCTTTCGGAAACGCTTCTCCGACTCGTATTTCGTGT 69698 Query 76512 ATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACA 76571 | | | || || | || ||||| || || | ||| || || || | || |||| Sbjct 69697 AGAGCTCCTCGAACTTCTCGCCCCAGCAGTCCTCAAGACCGGGGCACTCGTGGGGGCACA 69638 Query 76572 TCAATGACCACTCACCATC---TTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATA 76628 ||| ||||| || || |||| || || ||||| || ||||| || ||||| | Sbjct 69637 TCAGAGACCAGGTGCCGTCGGTTTCC---ACGCGCTTCATGAAAAGATCGGGGATCCAGA 69581 Query 76629 GAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTA 76688 ||||| || ||||| |||| | ||| ||| || |||||| || | ||| | Sbjct 69580 GAGCATAGAAGAGATCACGGGCACGCTCTTCCTCAGCACCACGATTCTTCTTCATATCCA 69521 Query 76689 GGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTT 76748 || ||| | || || | ||||| ||||| || || || || | | | || || || | Sbjct 69520 TGACCTCAAAGATGTCTGCGTGCCACGGTTCGAGGTAGATGGCGAAAGCGCCAGGACGCT 69461 Query 76749 TATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAA 76808 | || || |||||||| | || | |||||||| || | || | | ||| || | || Sbjct 69460 TGTTTCCGCCCTGATCGACGTAGCGAGCAGTGTTGTTGAATACACGGAGCATCGGGACAA 69401 Query 76809 TGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAA 76868 ||| || || || || |||| ||| | |||| ||||| || || || Sbjct 69400 GGCCATTGGAGACTCCGCCGGTACCAGCAATGTGGGATCCAGTGGCACGGATGTTGTGAA 69341 Query 76869 TAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCAT 76928 | || || || || || || || ||||| || || | ||||||||||| Sbjct 69340 CATTGAGCCCAATGCCGCCGGCTGACTTTGAGATCTTTGCGCATTGCTTCAATGTGTCGA 69281 Query 76929 AGATGCCCTCTATACTATCATCCATCAT-GTTAAGAAGAAAACAGCTAGACATTTGATGA 76987 | ||||| || || || |||||| ||| |||| ||| || ||| ||||| ||| | Sbjct 69280 AAATGCCATCGATGCTGTCATCCGACATAGTTAGCAAG-AAGCAGGACGACATCTGAGGC 69222 Query 76988 TGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGT 77047 || || || ||||| |||| || || | ||||| |||||||| || || | Sbjct 69221 CGAGGGGTACCCGCATTGAACAGAGTGGGCGTGGCATGGGTGAACCAGCGCTCGGACATG 69162 Query 77048 AGATTGTATGT 77058 |||||||| || Sbjct 69161 AGATTGTAGGT 69151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712926023020800