Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq394 87.8 2e-12 >seq394 Length=505719 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/238 (68%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| || ||||| || | |||||||| || |||||| | ||| ||| |||| Sbjct 8746 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACGATTACCCTCGAAGTCGAAGGCAGC 8687 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | || || || || ||||| |||||| ||||| || || Sbjct 8686 GACACCATTGAAAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 8627 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | ||||| | || ||||| || | |||||| || | ||| || || Sbjct 8626 CAACGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCAGCGACTACAAC 8567 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA-TAAATAA 111336 || ||||| |||||||| || ||| | || | |||||||||||||| || ||||||| Sbjct 8566 ATCCAAAAGGAATCTACCCTTCATCTCGTCCTTCGTCTGCGCGGTGGTAACTAAATAA 8509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421806367625440