Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26]
60,399 sequences; 185,376,996 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq50816 87.8 2e-12
>seq50816
Length=773
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || |||||||||||| | || || |||||||| || |||| || ||||| |
Sbjct 161 AATGCAGATTTTCGTAAAAACGTTGACCGGTAAAACCATAACTCTCGAGGTGGAAGCGTC 102
Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
||||| | || ||| | |||| | || || | |||||||| || ||||| | || |
Sbjct 101 CGACACGATTGAAAATG-TCAAAGCTAAGATCCAGGACAAAGAAGGAATCCCACCAGATC 43
Query 40808 AGCAACGACTCATCTACGCGGGCAA 40832
||||||| || |||| ||| || ||
Sbjct 42 AGCAACGTCTTATCTTCGCCGGTAA 18
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514830215944240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |