Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26] 60,399 sequences; 185,376,996 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq50816 87.8 2e-12 >seq50816 Length=773 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || |||||||||||| | || || |||||||| || |||| || ||||| | Sbjct 161 AATGCAGATTTTCGTAAAAACGTTGACCGGTAAAACCATAACTCTCGAGGTGGAAGCGTC 102 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | || ||| | |||| | || || | |||||||| || ||||| | || | Sbjct 101 CGACACGATTGAAAATG-TCAAAGCTAAGATCCAGGACAAAGAAGGAATCCCACCAGATC 43 Query 40808 AGCAACGACTCATCTACGCGGGCAA 40832 ||||||| || |||| ||| || || Sbjct 42 AGCAACGTCTTATCTTCGCCGGTAA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514830215944240