Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26] 60,399 sequences; 185,376,996 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq50816 98.7 2e-15 >seq50816 Length=773 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || || || || || | || ||||| || || ||||||||||| ||||| ||||| Sbjct 18 TTACCGGCGAAGATAAGACGTTGCTGATCTGGTGGGATTCCTTCTTTGTCCTGGATCTTA 77 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 ||||| |||||||| | || ||| | ||| ||||| || || || || ||||| || Sbjct 78 GCTTTGACATTTTCAATCGTGTCGGACGCTTCCACCTCGAGAGTTATGGTTTTACCGGTC 137 Query 104537 AGTGTTTTTACAAATATCTGCATT 104560 | |||||||| || ||||||||| Sbjct 138 AACGTTTTTACGAAAATCTGCATT 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150507376315492