Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26] 60,399 sequences; 185,376,996 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq50816 86.0 5e-12 >seq50816 Length=773 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/148 (74%), Gaps = 8/148 (5%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || ||||| || |||||||||||| |||| || |||| ||||| |||| Sbjct 161 AATGCAGATTTTCGTAAAAACGTTGACCGGTAAAACCATAACTCTCGAGGTGGAAGCGTC 102 Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 ||||| || || |||| |||| || ||| ||||||||||| || ||||| | Sbjct 101 CGACACGATTGAAAATGTCA---AAGC-TAAGATCCAGGACAAAGAAGGAATCCCACCAG 46 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAA 25141 | || || || |||| || ||||| || Sbjct 45 ATCAGCAACGTCTTATCTTCGCCGGTAA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433009021707185