Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26] 60,399 sequences; 185,376,996 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq50816 100 2e-16 >seq50816 Length=773 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||| || ||||||||||| | ||||| || |||||| | || Sbjct 160 ATGCAGATTTTCGTAAAAACGTTGACCGGTAAAACCATAACTCTCGAGGTGGAAGCGTCC 101 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || ||||| || || || ||||| || || || ||||| ||||| Sbjct 100 GACACGATTGAAAATGTCAAAGCTAAGATCCAGGACAAAGAAGGAATCCCACCAGATCAG 41 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 ||||||||||| || ||||| || Sbjct 40 CAACGTCTTATCTTCGCCGGTAA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419419032841435