Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26] 60,399 sequences; 185,376,996 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq50816 87.8 2e-12 seq21953 82.4 8e-11 >seq50816 Length=773 Score = 87.8 bits (96), Expect = 2e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 64299 GCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTT 64358 |||| ||||| | || || || ||||| || || || ||||||||||| || || || | Sbjct 16 GCTTACCGGCGAAGATAAGACGTTGCTGATCTGGTGGGATTCCTTCTTTGTCCTGGATCT 75 Query 64359 TTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 | ||||| ||| || | || || || ||||| || | ||||| ||| || ||| Sbjct 76 TA-GCTTTGACATTTTCAATCGTGTCGGACGCTTCCACCTCGAGAGTTATGGTTTTACCG 134 Query 64418 GTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| |||||||||||||| |||||| Sbjct 135 GTCAACGTTTTTACGAAAATCTGCATT 161 >seq21953 Length=2392 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 ||||| | || || |||||||||||||||||||| || || || || || || || | Sbjct 612 CCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATCCCCTCCTTGTCCTGAATCTTAGCC 671 Query 64364 TTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423 || ||| ||| | ||||| || || ||||| | |||| ||||| ||||||| Sbjct 672 TTCACATTCTCAATAGTATCCGAAGCCTCAACTTCGAGTGTTATTGTCTTACCGGTCAGG 731 Query 64424 GTTTTTACGAAAATTTGCATTTT 64446 ||||| | ||| |||||||| || Sbjct 732 GTTTTGATGAAGATTTGCATCTT 754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499267574421560