Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26]
60,399 sequences; 185,376,996 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq50816 87.8 2e-12
seq21953 82.4 8e-11
>seq50816
Length=773
Score = 87.8 bits (96), Expect = 2e-12
Identities = 109/147 (74%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 64299 GCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTT 64358
|||| ||||| | || || || ||||| || || || ||||||||||| || || || |
Sbjct 16 GCTTACCGGCGAAGATAAGACGTTGCTGATCTGGTGGGATTCCTTCTTTGTCCTGGATCT 75
Query 64359 TTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417
| ||||| ||| || | || || || ||||| || | ||||| ||| || |||
Sbjct 76 TA-GCTTTGACATTTTCAATCGTGTCGGACGCTTCCACCTCGAGAGTTATGGTTTTACCG 134
Query 64418 GTCAAAGTTTTTACGAAAATTTGCATT 64444
||||| |||||||||||||| ||||||
Sbjct 135 GTCAACGTTTTTACGAAAATCTGCATT 161
>seq21953
Length=2392
Score = 82.4 bits (90), Expect = 8e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363
||||| | || || |||||||||||||||||||| || || || || || || || |
Sbjct 612 CCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATCCCCTCCTTGTCCTGAATCTTAGCC 671
Query 64364 TTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423
|| ||| ||| | ||||| || || ||||| | |||| ||||| |||||||
Sbjct 672 TTCACATTCTCAATAGTATCCGAAGCCTCAACTTCGAGTGTTATTGTCTTACCGGTCAGG 731
Query 64424 GTTTTTACGAAAATTTGCATTTT 64446
||||| | ||| |||||||| ||
Sbjct 732 GTTTTGATGAAGATTTGCATCTT 754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499267574421560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |