Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26] 60,399 sequences; 185,376,996 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq60000 98.7 6e-15 >seq60000 Length=517 Score = 98.7 bits (108), Expect = 6e-15 Identities = 168/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 474637 AGGTGAAACTAAACAATTTTCAC--CGGAACAAATTTCTTCAATGGTTTTAGCCAAAATG 474694 |||||||| || | ||||||| | || | || || || ||| || | | |||||| Sbjct 491 AGGTGAAA--AACGACTTTTCACTCCCGAGGAGATCTCGTCGATGATTCTTGTGAAAATG 434 Query 474695 AAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCA 474754 ||| | ||||| | | || |||| |||| || || || || || || || Sbjct 433 AAAGAGACCGCCGAAGCGTTCCTCGGACGTACAGTACGAGAAGCCGTTATCACAGTGCCG 374 Query 474755 GCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTT 474814 ||||||||||| ||| || ||||| || || || || || || | ||||| || | Sbjct 373 GCATATTTTAACGATAGCCAGCGTCAGGCCACGAAGGACGCTGGCACGATTGCCGGCTTG 314 Query 474815 AATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAG 474874 ||||| || || || || || ||||| ||||| || ||||| || ||||||||||| ||| Sbjct 313 AATGTGTTGCGGATCATCAACGAACCCACAGCCGCAGCACTCGCCTATGGTCTTGACAAG 254 Query 474875 AA 474876 || Sbjct 253 AA 252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265588393834052