Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26]
60,399 sequences; 185,376,996 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq325 96.9 3e-14
seq60000 86.0 5e-11
>seq325
Length=24696
Score = 96.9 bits (106), Expect = 3e-14
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| || || |||||||| |||| ||| ||||| ||||| || || || || | || ||
Sbjct 4180 TTCTTGTCGAGACCATAGGCAATAGCTGCAGCCGTTGGCTCGTTGATGATACGCAGGACG 4121
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || || | ||| || |||||||| || || || | ||||||||||| |||||
Sbjct 4120 TTGAGGCCCGAAATCGCCCCGGCATCTTTTGTTGCCTGACGCTGTGAATCGTTGAAATAA 4061
Query 282452 GCAGGAACAGTAATAACGGCATC 282474
||||| || |||| |||||||||
Sbjct 4060 GCAGGCACGGTAACAACGGCATC 4038
>seq60000
Length=517
Score = 86.0 bits (94), Expect = 5e-11
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| || ||||||||||| || | || || || || ||||| || || || | ||| |||
Sbjct 252 TTCTTGTCAAGACCATAGGCGAGTGCTGCGGCTGTGGGTTCGTTGATGATCCGCAACACA 311
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| | || ||||| | || || || || ||||| || | || |||||||||||||
Sbjct 312 TTCAAGCCGGCAATCGTGCCAGCGTCCTTCGTGGCCTGACGCTGGCTATCGTTAAAATAT 371
Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACT 282481
|| || || || |||||||| ||| ||||
Sbjct 372 GCCGGCACTGTGATAACGGCTTCTCGTACT 401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3737665064346174
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |