Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26] 60,399 sequences; 185,376,996 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq39820 419 9e-113 >seq39820 Length=1149 Score = 419 bits (464), Expect = 9e-113 Identities = 234/235 (99%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 22382 GGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACT 22441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACT 60 Query 22442 GCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGA 22501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGA 120 Query 22502 AAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCA 22561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCA 180 Query 22562 TACGGAATTCCGGATGAGCATTCATCAGGCGGGCAAGAATGTGAATAAAGGCCGG 22616 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TACGAAATTCCGGATGAGCATTCATCAGGCGGGCAAGAATGTGAATAAAGGCCGG 235 Score = 370 bits (410), Expect = 4e-98 Identities = 205/205 (100%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 22694 ATTGAGCAACTGACTGAAATGCCTCAAAATGTTCTTTACGATGCCATTGGGATATATCAA 22753 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 499 ATTGAGCAACTGACTGAAATGCCTCAAAATGTTCTTTACGATGCCATTGGGATATATCAA 558 Query 22754 CGGTGGTATATCCAGTGAtttttttCTCCATTTTAGCTTCCTTAGCTCCTGAAAATCTCG 22813 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 559 CGGTGGTATATCCAGTGATTTTTTTCTCCATTTTAGCTTCCTTAGCTCCTGAAAATCTCG 618 Query 22814 ATAACTCAAAAAATACGCCCGGTAGTGATCTTATTTCATTATGGTGAAAGTTGGAACCTC 22873 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 619 ATAACTCAAAAAATACGCCCGGTAGTGATCTTATTTCATTATGGTGAAAGTTGGAACCTC 678 Query 22874 TTACGTGCCGATCAACGTCTCATTT 22898 ||||||||||||||||||||||||| Sbjct 679 TTACGTGCCGATCAACGTCTCATTT 703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184312509157482