Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26]
60,399 sequences; 185,376,996 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq50816 131 4e-25
seq21953 89.7 1e-12
>seq50816
Length=773
Score = 131 bits (144), Expect = 4e-25
Identities = 113/140 (81%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| ||||| | || || ||||| || || |||||||||||| || |||
Sbjct 157 CAGATTTTCGTAAAAACGTTGACCGGTAAAACCATAACTCTCGAGGTGGAAGCGTCCGAC 98
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || |||||| ||||| |||||||||||||||||||| || || ||||||
Sbjct 97 ACGATTGAAAATGTCAAAGCTAAGATCCAGGACAAAGAAGGAATCCCACCAGATCAGCAA 38
Query 178044 CGACTTATCTTCGCCGGAAA 178063
|| |||||||||||||| ||
Sbjct 37 CGTCTTATCTTCGCCGGTAA 18
>seq21953
Length=2392
Score = 89.7 bits (98), Expect = 1e-12
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||| | ||||| || || || || || || || ||||| || || || ||
Sbjct 748 CAAATCTTCATCAAAACCCTGACCGGTAAGACAATAACACTCGAAGTTGAGGCTTCGGAT 689
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| || || |||||||||||||| || || || ||||| ||||||||
Sbjct 688 ACTATTGAGAATGTGAAGGCTAAGATTCAGGACAAGGAGGGGATTCCTCCCGACCAGCAG 629
Query 178044 CGACTTATCTTCGCCGG 178060
|| || |||||||||||
Sbjct 628 CGTCTGATCTTCGCCGG 612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202799677940406
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |