Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq15 668 0.0 seq5 547 8e-151 seq39 210 3e-49 >seq15 Length=622252 Score = 668 bits (740), Expect = 0.0 Identities = 1442/2137 (67%), Gaps = 51/2137 (2%) Strand=Plus/Minus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || ||| | || | || || |||||||| || |||| ||| | ||||||| | ||| Sbjct 204878 GCTGGTCTTGTTCTTAAGTAATACATTCCAGTCTTTAAACCACGTTTCCATCCATGGAAA 204819 Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135 |||||| | | || ||| | || | ||||| ||| | ||| | |||||| | Sbjct 204818 TGCATAGAACTACATACGGCATATGTTGGTTTTGCTACATGAAGATTAAGTGATTGAGAT 204759 Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 62195 ||||| ||| | ||||| | || |||||||| | ||||| |||||| | ||||||| Sbjct 204758 TGATCAATGTAAGCTCCACGATCAGCAGCCATCTCAATGATATCCTTTTGAGAAATTTCC 204699 Query 62196 CAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGAT 62252 |||| ||| ||||||| | ||| |||| | ||| | | |||| ||||| || Sbjct 204698 CAAACAGTCTTATAAAGTTCCTTGATATGTGTTGGTATTCCAGCGATATTTTGAATTGAA 204639 Query 62253 CCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 62312 ||| || || ||||| |||| | | || ||| |||| || || || | ||| Sbjct 204638 CCATTATTTGATATAATTTCATTCATAACTTCTTCACTCCACAAGTTAAGGTCAATCAAA 204579 Query 62313 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 62372 || |||| ||||| |||||||| | ||| || |||||||| | || | || || | Sbjct 204578 TCTTTAAGAAGATGAGGATTAACAATTTGGAAGTCTCCAGAGAGAACACGACGTGTAAAT 204519 Query 62373 ATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 62432 |||||| ||||| ||||| | || |||||||| || | |||||| ||||| || ||| Sbjct 204518 ATATTAGAAGTATATGGTTCAATAGATTCATTATTCCCTAGAATTTGGGCAGTAGAAGCA 204459 Query 62433 GTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTT 62490 || ||||| || || | || | |||||| | ||| ||| | | ||||| || | Sbjct 204458 GTTGGCATTGGAGCTAATAAAAGGGAATTTCTTACACC--ATGCTTGGCAATTTTTTCCT 204401 Query 62491 TTAGAGGTTCCCAATTCCA-AAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGA 62549 | | |||||| ||| ||| | | ||| || ||||| | Sbjct 204400 TCAATTTAGCCCAATCCCATAAGTTACTT-GGTGTTACATTCCACATATCATATTGTAAA 204342 Query 62550 ATACCGTTA----CTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGC 62605 || || ||| |||| | |||| |||||| || |||||||| ||||| |||| Sbjct 204341 ATTCCTTTAGAAACTGGTG----ATCCATGATATGTTTCATATGGTCCATCCTTAGCAGC 204286 Query 62606 TAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG 62665 || ||| || ||||| || || || | |||||| ||||| || || |||||||| || Sbjct 204285 TAATTCGCAGGAAGCCTCCAAAGCTCCATGATAAATAGTTTCAAAAATTTTCTTATTAAG 204226 Query 62666 ATCTTGTGCTTCCAGGCTATCA-AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATC 62724 |||| || | ||| || |||||||| | | || ||||| || ||||||| Sbjct 204225 TTCTTTGGCC-CGAGGAGATGTGAATGGATATCTCATAAGCATAAAACAATCAGCTAATC 204167 Query 62725 CTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAG 62784 ||||||||||||| || || || | |||||| || || | | || || || | || Sbjct 204166 CTTGAACACCAATTCCAATGGGGCGATGTCTAAAGTTTGATTTCTTTGCCTCAGGTACAG 204107 Query 62785 GATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTA-CTTTGACCACATCC 62843 |||||||||| | ||| ||||||||||| | |||| | ||| | ||| || ||| Sbjct 204106 GATAATAATTGACATCAATAATTTTATTCAAATTTTTAGCAAGAATCTTAGAA-ACAAGA 204048 Query 62844 TTCAGTTTGAGAAAATCAAATC------GCCCATC-----TATTA-CAAACATGTTCAAG 62891 | |||| ||||| |||| |||| | ||| | | || | ||||| Sbjct 204047 TGAAGTTGATTAAAATTAAATGATGGTTGCCCTTTCTCAATATCAACGAATCTATTCAAT 203988 Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951 |||| ||| | | ||||||||| || || |||| | | | ||||| | || ||| Sbjct 203987 GCAATTGATCCTAAATTACAAACAGCAACTTCATCTGGAGCACAATATTCAACAATTTCA 203928 Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011 || ||||||||| ||| || || ||||| || |||||||||||||| ||| | ||||| Sbjct 203927 GTACAAAGATTAGAACATTTAATTGTTCCCAAGTTTTGTTGATTACTTTTTCTATTACAA 203868 Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071 |||||| |||| || ||||||| |||||||| || ||| ||| |||| || | Sbjct 203867 TGATCCTTGTAAACCATATATGGAGTTCCAGTTTCTATTTGACTTTCACAAATCTTTTGC 203808 Query 63072 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATAC 63131 || | || | |||||| ||| | |||| | | | || | || || ||| ||| Sbjct 203807 CAAATAACCCTAGCCTTGATTTGTTTTCTGTAACGCTTCTCAGTCTCATACTTTGTGTAC 203748 Query 63132 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 63191 ||| ||| || || || |||||| || || ||||| |||||||||| ||||||||| Sbjct 203747 AATTTTTCAAATTCATCCCCCCAACAATCTTCTAATCCTGGACATTCATGAGGACACATC 203688 Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63251 || ||||| | | || | | || ||||||||||| | |||||||| ||| | | | Sbjct 203687 AATGACCAATATGAATCTTTTTCAACACGTTTCATAAACAAATCAGGAACCCATAAACC- 203629 Query 63252 ATA-AATAGATCTCTGGTTCTATGTTCCTCGTTT---CCTGTATTCTTTTTAAGATCGAG 63307 ||| |||| ||| | | | ||||||| | | |||||||| || |||||||| | Sbjct 203628 ATAGAATAAATCACGAGCAC---GTTCCTCTTCTGGTCCTGTATTTTTCTTAAGATCCAA 203572 Query 63308 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63367 || |||||||||| | |||||| |||||||| || || || | | ||||||| | || Sbjct 203571 AAATTCCATAATATCTGCATGCCATGGTTCCAAATAAATTGCAAAAGCTCCAGGTCTCTT 203512 Query 63368 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63427 ||||| || ||||| | ||||| || || || || |||||||||||||||| | | Sbjct 203511 ATTTCCACCTTGATCAACATATCTTGCAGTATTGTTGAAAACTCTCAACATTGGTACCAA 203452 Query 63428 ACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT 63487 || |||||| | ||||| || || ||| | |||| ||||||||||| | || Sbjct 203451 TCCATTTGATGTTCCATTAGTTCCACCAATAAATGATCCATTGGCACGAATACAATGAAC 203392 Query 63488 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATA 63547 || || || || || || ||| || ||||| || ||| |||| || || ||||| Sbjct 203391 ATTTAATCCAATACCTCCAGCAGATTTTGAAATTAAAGCACATTGTTTCAATGTATCATA 203332 Query 63548 GATACCCTCTATGCTATCATCGATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63606 || || || || ||| | ||| ||||| ||||| || ||||| ||| ||| Sbjct 203331 AATCCCTTCAATAGAATCTCCAGCCATTGTTAATAAGAAA-CATGAAGACAATTGTGGAC 203273 Query 63607 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 63666 || | ||||| |||||||||| || |||||||| || ||||||||||| | || | | Sbjct 203272 GAGTTGTTCCTGCATTAAATAGTGTTGGAGAAGCATGTGTAAACCATTTCTGTGACATAA 203213 Query 63667 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 63726 |||||| || || ||| |||| || ||||| | |||||| || || || || | || Sbjct 203212 AATTGTATGTTTCGATAACTGAATCAATATCTTCTCCATGAATACCAACAGCAACTCTCA 203153 Query 63727 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63786 | | | || || ||||||||| | || || ||||| ||||| || | || || || Sbjct 203152 TAAGTAAATGTTGTGGTCTTTCAGCAATTTTCTTGTTGATTTTTAAAAGATAAGAACGTT 203093 Query 63787 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63846 | |||||||| || ||||| | ||| |||||||| || |||| ||| | || | Sbjct 203092 CTAAAGTTTTGAATCCAAAGAATGAGTAGTCAAAGTCTCTGTCATAAACGATAGCAGAAT 203033 Query 63847 TGAGTTTATCCTTATATTTGTTAACTATATCCATG-GTGATACTTGA--AATAATCGGAG 63903 | ||||| || || ||| | || || || || || | ||| | ||| || || | Sbjct 203032 TAAGTTTGTCAGCATGTTTTTGAATTACAT---TGTATGTTTCTTCACTAATCATTGGTG 202976 Query 63904 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 63963 |||| ||| | || || | ||| | | | || ||| ||||| ||| Sbjct 202975 TATGTACACCAGTAATATCATGACGATAATGATACAGGTCACTCATAACTTCTGAGAATG 202916 Query 63964 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAAT 64023 ||| ||||||| || || | || || | || ||||| || || | ||| ||||||| Sbjct 202915 TTTTCTTTGTTTGTTTATGCATGTTGGAGATAGCGATTCTTGCTGCCAAAATAGCATAAT 202856 Query 64024 CCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACC 64082 | ||||| |||| || || | | |||||| | || || || || | |||||||| || Sbjct 202855 CAGGATGAAGTGTTGT-CATGTTTGCTGCTGTCTCTGCGGCAAGGTTATCCAATTCAACG 202797 Query 64083 GTTGTTACTCCATTATATATTCCTTGAATAACCTTCA 64119 || | || || || |||| ||||| ||||| |||| Sbjct 202796 GTAGAAACACCTTTGTATAAACCTTGGATAACTTTCA 202760 >seq5 Length=1449561 Score = 547 bits (606), Expect = 8e-151 Identities = 1429/2146 (67%), Gaps = 79/2146 (4%) Strand=Plus/Minus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || |||||||| | || ||| ||||| || ||||||| ||| || |||||||| |||| Sbjct 1213746 GCTGGTTTCGTTCTTAAATAATACATCCCTGTTTTTAAACCAAGTTTCCATCCGCGAAAA 1213687 Query 62076 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 62132 || || ||| || | | || | || | ||||| || ||||| | |||||| Sbjct 1213686 TGTATGGAACTACATATTCCGTAAGAT---GGTTTTGCTACATAAATATTAAGAGATTGG 1213630 Query 62133 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATT 62192 |||||| || || ||||| || ||||||||||| | ||||| |||||| | ||| Sbjct 1213629 GATTGATCAATAAATGCTCCTCTATCTGCAGCCATATCAATGATGTCCTTTTGAGATATT 1213570 Query 62193 TCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTTTGTATTCTGA---AT 62248 ||||| | || ||||| || || |||||||| ||||||| | || | || || Sbjct 1213569 TCCCATACGGTCTTATACAAATC-CTTAATATGATCTGGAATTCCTTTAATATGTTTTAT 1213511 Query 62249 GGATCCACCATCTGCCAT-AATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGG 62307 |||||| || || ||| || | || ||||||||||| || ||| || Sbjct 1213510 AGATCCATTATAATAAATTAATTGGTTTAATAAT-TCATCATTCCACAAATTTAATTCAA 1213452 Query 62308 TTAAAAC-TCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGA 62366 ||| | | ||| || || || || || |||||||| |||||||||||||| | | Sbjct 1213451 CCAAATCGTGTAAA-AGGTGTGGGTTTACCACTTGAAAATCTCCAGACAATACCCGTCTC 1213393 Query 62367 GTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTT 62426 | || | ||| ||||| ||||| | ||||||||||| || ||||||||||||||| Sbjct 1213392 ATATACAAATTTGAAGTATAAGGTTCAAATGACTCATTATTACCAAAAATTTGAGCAGTT 1213333 Query 62427 GATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTA 62486 ||||| || ||||| || || ||||| || |||||| | ||| ||| |||| ||||| Sbjct 1213332 GATGCTGTTGGCATTGGAGCTACCAACAATGAATTTCTTATACCATATTTTCTAATTTTT 1213273 Query 62487 TCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGT 62546 ||||||| | ||||| ||| | || || ||| |||| Sbjct 1213272 TCTTTTAATAATGACCAATCCCATAAATTACTTGGAGTAACTTTCCATAAATCATATTGT 1213213 Query 62547 AGAATACCGTTACTGGCGTAC----GATCCTACATATGTATCGTATGGTCCTTCCTTCTC 62602 | ||| || || | ||| || ||| |||| || || || || || | | || Sbjct 1213212 AAAATGCC---ACGAGA-TACAAGAGAACCTTCATAAGTTTCATAAGGACCATATTCTTC 1213157 Query 62603 AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT 62662 ||||| |||||| || || |||||||| | ||| || ||||| || || || || || Sbjct 1213156 AGCTAATTCACATGAAGCTTCCAATGCACCATGATATATTGTTTCAAATATTTTTTTGTT 1213097 Query 62663 TAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAA 62722 || ||||| |||| | | | ||||| |||| || ||||| | || || || Sbjct 1213096 TAAATCTTTAGCTTGTGAAGAAGCGTAGGGATATCTTAAAAGTATAAAAGTATCTGCCAA 1213037 Query 62723 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62782 ||||||||||||||| || ||||| | |||| || |||| || || || |||| | Sbjct 1213036 TCCTTGAACACCAATGCCAATAGGACGATGTTTCATATTTGATATACGAGTTTCTTCTAA 1212977 Query 62783 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG----ACAATT-----ACTTT 62833 ||||||||||| |||||||| || ||||| | |||| | | | || | ||| Sbjct 1212976 TGGATAATAATTTATATCTATTATCTTATTCAAATTTTTTGTTAAAAGTTTAGTAATTTT 1212917 Query 62834 GACCACATCCTTCAGTTTGA--GAA--AATCAAATCGCCCATCTATT---ACAAACATGT 62886 | | | || | |||| ||| |||| ||| ||| || ||||| | | Sbjct 1212916 GTGAAGTTGTTTAAAATTGAATGAAGTAATCCCATCT----TCTTTTTCAACAAATCTAT 1212861 Query 62887 TCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTA 62946 | || |||| |||| ||| ||||| || || | ||||| | | | |||||| | | Sbjct 1212860 TTAAAGCAATAGATCCCAAGTTACATACAGCGATTTCATTTGAAGAAGAATATTGAACAA 1212801 Query 62947 TCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGT 63006 | || || || | ||| ||| || || |||||||||| | ||||||||| || | Sbjct 1212800 TTTCTGTACATAAATTTGAACATTTTATGATTCCTAAATTATTTTGATTACTTTTACGAT 1212741 Query 63007 TACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCG 63066 |||| ||| ||||||| ||| | || || ||||||||||| ||| ||| || Sbjct 1212740 TACAATGATCTTTATAAACCATGTAAGGTGTTCCAGTTTCAATTTGACTTTCACATATTT 1212681 Query 63067 CTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTC--TTTCGTATAG 63124 || ||||| | ||| ||||| ||| || || ||| | ||| || |||| ||| Sbjct 1212680 TTTGCCAGAGCATTCGTGCCTTGATTT--GACTTCTATAACGTTTTTCATTTTCATATTT 1212623 Query 63125 TGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 63184 ||| || ||| || || ||||||||| ||| || | || |||||||| | || Sbjct 1212622 AACATATAAAGTTTCAAATTCTTCTCCCCAACTATTATCAAGACCTGGACATTCGTGAGG 1212563 Query 63185 ACACATCAACGACCACTCTCCGTCATCCTTCA-CTCGTTTCATAAAGAGATCAGGAATCC 63243 ||||||||| ||||| | || | |||| | ||||||||||| | |||||||| || Sbjct 1212562 ACACATCAATGACCAATAAGAATCC-CTTTCAACACGTTTCATAAATAAATCAGGAACCC 1212504 Query 63244 AAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT---CCTGTATTCTTTTTAA 63300 | | | | ||||| ||| | | | ||||||| | |||||||| || |||| Sbjct 1212503 ATAAACCATAAAATAAATCACGAGCAC---GTTCCTCTTCCGGACCTGTATTTTTCTTAA 1212447 Query 63301 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAG 63360 ||| | || | |||||| | |||||| ||||| | || || || | |||| | Sbjct 1212446 GATTTAAAAATTGAAAAATATCTGCATGCCATGGTTCAATATAAATAGCAAATGCTCCTG 1212387 Query 63361 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 63420 | | ||| ||||| || ||||| | || | ||| || | |||| | |||| ||||| | Sbjct 1212386 GTCTTTTATTTCCACCTTGATCAACATAACGAGCAGTATCATTAAATACTCGTAACATAG 1212327 Query 63421 GAA-TAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA 63479 ||| |||| || ||||| || ||||| || || ||| | ||| ||||||||||| Sbjct 1212326 GAACTAAT-CCATTTGAAATTCCATTTGTTCCACTAATAAAAGATCCTGTGGCACGAATA 1212268 Query 63480 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63539 ||| ||| |||||| | ||| ||||| ||| || |||| || || ||| | Sbjct 1212267 TTATTAACACTTAGACCAACTCCACCTGCACCTTTTGAAATTATAGCACAATTTTTAAGA 1212208 Query 63540 GTGTCATAGATACCCTCTATGCTATCATCGATCA-TGTTAAGTAGAAAACAGCTAGACAT 63598 || ||||| ||||| ||||| |||||| | || |||||| || |||||| |||| Sbjct 1212207 GTATCATAAATACCTTCTATTGAATCATCCACCATTGTTAA-TAAAAAACATGATGACAA 1212149 Query 63599 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 63658 ||| ||||| |||||| |||| || || || || || ||||||||||| Sbjct 1212148 TTGTCCTTTTGGTGTTCCTGCATTATATAATGTTGGTGATGCATGTAAAAACCATTTTTG 1212089 Query 63659 AGAAAGTAGA-TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTG 63717 ||| | || | || || || |||| | || || ||||| | |||||| || || | Sbjct 1212088 AGACA-TACAGTTATATGTTTCAAGTACAGATTCAATATCTTCTCCATGAATACCAACAG 1212030 Query 63718 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGT 63777 | |||||||| || | || || ||||||||||| || | | || ||| | ||||| | Sbjct 1212029 CAACACGCATAAAAAGATGTTGTGGTCTTTCAACAATACAGCTATTAATTCTTAACAAAT 1211970 Query 63778 AGGATTTTTCCAAAGTTTTAAAACCAAA-ATAGTTGTATGAAAAGTCTCGTTCGTAAATA 63836 | ||| |||||| |||||||||||||| | ||| || || |||| || | | Sbjct 1211969 ATGATCGTTCCAACGTTTTAAAACCAAAGAAAGTAAAATTGTAA-TCTCTTTTATGATCG 1211911 Query 63837 ATAACCGAGTTGAGTTTATCCTTATATTTGT---TAACTATATCCATGGTGATACTTGAA 63893 || | || | | | | || |||| ||| | ||| || || | | ||| | Sbjct 1211910 ATTGCTGAATCTAATATTTCTTTATGTTTTTGAATAATTAAATTAGTTTTTTCACT---A 1211854 Query 63894 ATAATCGGAGAATG---TTTCCCATTTTTAGGATTAACATAGTTGAATA-AATC-CTCCA 63948 ||||| ||| ||| ||| |||||| ||| | || || ||| |||| |||| Sbjct 1211853 ATAATTGGACTATGTCTTTTTGTATTTTT---ATTTATATTATT--ATACAATCTATCCA 1211799 Query 63949 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGG 64008 | |||| ||| | || || |||| || || | |||||| | || ||||| | | Sbjct 1211798 TAACTTTTGAAAAAACTTCTTCCGTTTGTTTATGCATATTTGAAATAGCAATTCTAGAAG 1211739 Query 64009 CTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAG 64068 | | |||| ||||||| |||||| ||| | | | || || | ||| ||||| | Sbjct 1211738 CCAAAATGCCATAATCAGGATGTATAACAGTTCTATTAGCAGCAACTTCAGCTGCTAAGT 1211679 Query 64069 TGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAAC 64114 | || | ||| || || ||||| || ||||||| |||||||| ||| Sbjct 1211678 TATCAAGTTCAACAGTAGTTACACCTTTATATAATCCTTGAACAAC 1211633 >seq39 Length=206625 Score = 210 bits (232), Expect = 3e-49 Identities = 538/810 (66%), Gaps = 12/810 (1%) Strand=Plus/Plus Query 32955 TCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGAG---ACATAACTCCCAT 33011 || |||||| ||| |||| || | |||| | ||||||| || ||||||| ||||| Sbjct 48598 TCATTAAAAATCAGCATCCAAGGTAAAAGTACGTTCTTCTTCAGTGCACATAAC-CCCAT 48656 Query 33012 TT-TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATAT 33070 | |||| |||||| || ||||| || ||||| || |||||||| | ||| | | Sbjct 48657 ATCTTTGATATTCAGAAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTCAATTGAAAGGT 48716 Query 33071 TTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAA 33130 || ||||||||||||| ||||| |||| |||||||||||| | | ||||| | Sbjct 48717 TTACCATGAAATCAAATGGATTTTTAACCTTATAAATTTTTGGCATGTTTAGTTCAGTTA 48776 Query 33131 TCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 33190 | ||| || || |||| || || || ||| | | ||||||| || || | Sbjct 48777 AAAGGTGATCAGCAACATATTCAATGTAGGTACACATTAATCTTGAATTCATACCAATCA 48836 Query 33191 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 33250 | ||| |||||||| |||| | | |||| | ||||| || |||| | | || | Sbjct 48837 TATCAACAGGAAGAGCATCAGTTAAATATTCCTTCTCAATTTCGACAGCATTTCTAATTA 48896 Query 33251 TAG-ATCTA-ACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGC 33308 | || | ||| | || || |||| || | | || ||||||| | ||| || Sbjct 48897 TTTCATGCACACGCT--CTACAGACGGTTTATTCTCAAGATAACTAAACATGAGACAAGC 48954 Query 33309 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 33368 ||||| | || | || || ||||| |||| ||| || ||| | || || Sbjct 48955 AAAATCTCTATGTAATCCTTCATCTCTGGAGATTAATTCATTTGAATGACACAAACCTGG 49014 Query 33369 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCC 33428 ||||| ||||| ||||| | |||||| || ||||| || || ||||| || || ||||| Sbjct 49015 CATTAATCCACGTTTTTTTAACCAAAAGATTGAAGCAAAAGAACCAGAGAAAAATATTCC 49074 Query 33429 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT-GT--ATCCA 33485 ||| || || ||||| ||||||| | |||||| || || | | || || ||||| Sbjct 49075 TTCAACAGCGGCAAAAGCAATAATACGTTCTCCAAAAGATGCATTCTTATCGTTAATCCA 49134 Query 33486 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545 || ||||||||| |||||||| || | | | | | | || ||||| || || Sbjct 49135 TCTTAAAGCCCAATCAGCCTTCTTCTTGATAAATTCAAACTCTGTTAAAGCATTGAAAAG 49194 Query 33546 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33605 | ||| |||||| | | || | ||| || || || || |||||| || Sbjct 49195 CTTATTTCTTTCATCAGTGTCACGGATATATGTTTCAATTAACTTGGAATACATCTCACT 49254 Query 33606 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 33665 |||||| || || || || || |||||||| || || | | || || | | || || Sbjct 49255 ATGAATATTCTCCATAGCAATTTGAAATCCATAAAAGAAACGTGCTTCAGGGACTTGGAC 49314 Query 33666 TTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33725 |||| | |||||| ||| ||||||||||||| || ||||| || || ||||| || Sbjct 49315 TTCTTTTGAAAATCTTTCAACCAAATTTTCATTGACAATTCCATCGGAAGCAGCAAAGAA 49374 Query 33726 CGCCAATACATGTTTTATAAAATATTTTTC 33755 || | ||| | |||||| ||| |||| Sbjct 49375 GGCTAGGACACGAGATATAAAGTATCTTTC 49404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622933105819600