Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq122 91.5 2e-13 >seq122 Length=25786 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 6974 TCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGT 7033 ||||| || ||||| || ||| || || ||||| ||||| || ||||| || || Sbjct 17519 TCGCCGGGCTGCAGCAGGGCGAAGTACACGGCCTGGTTGGCCTGGGAGCCGGAGTGCGGC 17460 Query 7034 TGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCG 7093 || ||||| ||| | | | | ||||| | || || || || || ||||| | |||| Sbjct 17459 TGCACGTTGGCGTAGTCGGCGCCGAACAGCTGCTTGGCGCGGTCGATGGCCAGTTGCTCG 17400 Query 7094 ATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATAC 7153 | | | ||| | | | | || || ||||| || || ||||| || || || || || ||| Sbjct 17399 ACCACGTCGACGTATTCGCAGCCACCGTAGTAGCGCTTGCCCGGGTAGCCTTCGGCGTAC 17340 Query 7154 TTGTTGGTAAAAATAGAACCTTGCGCTTTCATAAC 7188 |||||||| | | || ||||| |||| ||| || Sbjct 17339 TTGTTGGTCAGTACCGAGCCTTGAGCTTCCATCAC 17305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553341080374800