Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq547 89.7 4e-13 >seq547 Length=3469 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || | || |||||||| ||||| | ||| || ||| Sbjct 1822 AATGCAAATTTTTGTTAAGACTTTAACTGGAAAAACAATTACTCTTGAAGTTGA-ACCAT 1764 Query 115345 C-GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | |||||| | ||||| || ||| || ||| || |||||||| |||| ||| Sbjct 1763 CTGACACT-ATCGACAACGTCAAATCCAAGATTCAAGACAAAGAAGGAATCCCACCAGAT 1705 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 || ||| | ||||| | ||| || |||||| | ||||||| | ||| | | || || Sbjct 1704 CAACAACGTCTTATCTTTGCCGGAAAACAACTTGAAGATGGAAGAACTCTCTCTGACTAC 1645 Query 115463 AACATTCAAAAAGAGTCTACTATACAT 115489 ||||| ||||| ||||| ||| | ||| Sbjct 1644 AACATCCAAAAGGAGTCAACTCTCCAT 1618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425334617177200