Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq15 699 0.0 seq5 567 9e-157 seq39 235 7e-57 seq1 95.1 2e-14 >seq15 Length=622252 Score = 699 bits (774), Expect = 0.0 Identities = 1451/2138 (68%), Gaps = 53/2138 (2%) Strand=Plus/Minus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || ||| | || | || || |||||||| || |||| ||| | ||||||| | ||| Sbjct 204878 GCTGGTCTTGTTCTTAAGTAATACATTCCAGTCTTTAAACCACGTTTCCATCCATGGAAA 204819 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 |||||| | | || ||| | || | ||||| ||| | ||| | |||||| | Sbjct 204818 TGCATAGAACTACATACGGCATATGTTGGTTTTGCTACATGAAGATTAAGTGATTGAGAT 204759 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 ||||| ||| | ||||| | || |||||||| | || || |||||| | ||||||| Sbjct 204758 TGATCAATGTAAGCTCCACGATCAGCAGCCATCTCAATGATATCCTTTTGAGAAATTTCC 204699 Query 62051 CAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGAT 62107 |||| ||| ||||||| | ||| |||| | ||| | | |||| ||||| || Sbjct 204698 CAAACAGTCTTATAAAGTTCCTTGATATGTGTTGGTATTCCAGCGATATTTTGAATTGAA 204639 Query 62108 CCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 62167 ||| || || ||||| |||| | | || ||| |||| || || || | ||| Sbjct 204638 CCATTATTTGATATAATTTCATTCATAACTTCTTCACTCCACAAGTTAAGGTCAATCAAA 204579 Query 62168 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 62227 || |||| ||||| |||||||| | ||| || |||||||| | || | || || | Sbjct 204578 TCTTTAAGAAGATGAGGATTAACAATTTGGAAGTCTCCAGAGAGAACACGACGTGTAAAT 204519 Query 62228 ATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 62287 |||||| ||||| ||||| | ||| |||||||| || | |||||| ||||| || ||| Sbjct 204518 ATATTAGAAGTATATGGTTCAATAGATTCATTATTCCCTAGAATTTGGGCAGTAGAAGCA 204459 Query 62288 GTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTT 62345 || ||||| || || | || | |||||| | ||| ||| | | ||||| || | Sbjct 204458 GTTGGCATTGGAGCTAATAAAAGGGAATTTCTTACACC--ATGCTTGGCAATTTTTTCCT 204401 Query 62346 TTAGAGGTTCCCAATTCCA-AAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGA 62404 | | |||||| ||| ||| | | ||| || ||||| | Sbjct 204400 TCAATTTAGCCCAATCCCATAAGTTACTT-GGTGTTACATTCCACATATCATATTGTAAA 204342 Query 62405 ATACCGTTA----CTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGC 62460 || || ||| |||| | |||| |||||| || |||||||| ||||| |||| Sbjct 204341 ATTCCTTTAGAAACTGGTG----ATCCATGATATGTTTCATATGGTCCATCCTTAGCAGC 204286 Query 62461 TAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG 62520 || ||| || ||||| || || || | |||||| ||||| || || |||||||| || Sbjct 204285 TAATTCGCAGGAAGCCTCCAAAGCTCCATGATAAATAGTTTCAAAAATTTTCTTATTAAG 204226 Query 62521 ATCTTGCGCTTCCAGGCTATCA-AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATC 62579 |||| || | ||| || |||||||| | | || ||||| || ||||||| Sbjct 204225 TTCTTTGGCC-CGAGGAGATGTGAATGGATATCTCATAAGCATAAAACAATCAGCTAATC 204167 Query 62580 CTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAG 62639 ||||||||||||| || || || | |||||| || || | | || || || | || Sbjct 204166 CTTGAACACCAATTCCAATGGGGCGATGTCTAAAGTTTGATTTCTTTGCCTCAGGTACAG 204107 Query 62640 GATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTA-CTTTGACCACATCC 62698 |||||||||| | ||| ||||||||||| | |||| | ||| | ||| || ||| Sbjct 204106 GATAATAATTGACATCAATAATTTTATTCAAATTTTTAGCAAGAATCTTAGAA-ACAAGA 204048 Query 62699 TTCAGTTTGAGAAAATCAAATC------GCCCATC-----TATTA-CAAACATGTTCAAT 62746 | |||| ||||| |||| |||| | ||| | | || | |||||| Sbjct 204047 TGAAGTTGATTAAAATTAAATGATGGTTGCCCTTTCTCAATATCAACGAATCTATTCAAT 203988 Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| ||| | | ||||||||| || || |||| | | | ||||| | || ||| Sbjct 203987 GCAATTGATCCTAAATTACAAACAGCAACTTCATCTGGAGCACAATATTCAACAATTTCA 203928 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 || ||||||||| ||| || || ||||| || |||||||||||||| ||| | ||||| Sbjct 203927 GTACAAAGATTAGAACATTTAATTGTTCCCAAGTTTTGTTGATTACTTTTTCTATTACAA 203868 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 |||||| |||| || ||||||| |||||||| || ||| ||| |||| || | Sbjct 203867 TGATCCTTGTAAACCATATATGGAGTTCCAGTTTCTATTTGACTTTCACAAATCTTTTGC 203808 Query 62927 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATAC 62986 || | || | |||||| ||| | |||| | ||| || | || || ||| ||| Sbjct 203807 CAAATAACCCTAGCCTTGATTTGTTTTCTGTAACGCTTCTCAGTCTCATACTTTGTGTAC 203748 Query 62987 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATC 63046 ||| ||| || || || |||||| || || | ||| |||||||||| ||||||||| Sbjct 203747 AATTTTTCAAATTCATCCCCCCAACAATCTTCTAATCCTGGACATTCATGAGGACACATC 203688 Query 63047 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63106 || ||||| | | || | | || ||||||||||| | |||||||| ||| | | | Sbjct 203687 AATGACCAATATGAATCTTTTTCAACACGTTTCATAAACAAATCAGGAACCCATAAACC- 203629 Query 63107 ATA-AATAGATCTCTGGTTCTATGTTCCTCGTTT---CCTGTATTCTTTTTAAGATCGAG 63162 ||| |||| ||| | | | ||||||| | | |||||||| || |||||||| | Sbjct 203628 ATAGAATAAATCACGAGCAC---GTTCCTCTTCTGGTCCTGTATTTTTCTTAAGATCCAA 203572 Query 63163 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63222 || |||||||||| | |||||| |||||||| || || || | | ||||||| | || Sbjct 203571 AAATTCCATAATATCTGCATGCCATGGTTCCAAATAAATTGCAAAAGCTCCAGGTCTCTT 203512 Query 63223 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63282 ||||| || ||||| | ||||| || || || || |||||||||||||||| | | Sbjct 203511 ATTTCCACCTTGATCAACATATCTTGCAGTATTGTTGAAAACTCTCAACATTGGTACCAA 203452 Query 63283 ACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAAT 63342 ||||| ||||| ||||| || || ||| | |||| ||||||||||| | || Sbjct 203451 TCCATTTGATGTTCCATTAGTTCCACCAATAAATGATCCATTGGCACGAATACAATGAAC 203392 Query 63343 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 63402 || || || || || || ||| || ||||| || ||| |||| || |||||||| Sbjct 203391 ATTTAATCCAATACCTCCAGCAGATTTTGAAATTAAAGCACATTGTTTCAATGTATCATA 203332 Query 63403 GATGCCCTCTATACTATCATCCATCA--TGTTAAGTAGAAAACAGCTAGACATTTGGTGA 63460 || || || ||| ||| |||| | |||||| ||||| || ||||| ||| || Sbjct 203331 AATCCCTTCAATAGAATC-TCCAGCCATTGTTAATAAGAAA-CATGAAGACAATTGTGGA 203274 Query 63461 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGT 63520 ||| | ||||| |||||||||| || |||||||| || ||||||||||| | || | Sbjct 203273 CGAGTTGTTCCTGCATTAAATAGTGTTGGAGAAGCATGTGTAAACCATTTCTGTGACATA 203214 Query 63521 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 63580 | |||||| || || ||| |||| || ||||| | |||||| || || || || | | Sbjct 203213 AAATTGTATGTTTCGATAACTGAATCAATATCTTCTCCATGAATACCAACAGCAACTCTC 203154 Query 63581 ATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTT 63640 || | | || || ||||||||| | || || ||||| ||||| || | || || | Sbjct 203153 ATAAGTAAATGTTGTGGTCTTTCAGCAATTTTCTTGTTGATTTTTAAAAGATAAGAACGT 203094 Query 63641 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAG 63700 || |||||||| || ||||| | ||| |||||||| || |||| ||| | || Sbjct 203093 TCTAAAGTTTTGAATCCAAAGAATGAGTAGTCAAAGTCTCTGTCATAAACGATAGCAGAA 203034 Query 63701 TTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGA--AATAATAGGAA 63758 || ||||| || || ||| | || ||||| || | ||| | ||| || || Sbjct 203033 TTAAGTTTGTCAGCATGTTTTTGAATTACATTGTATGT--TTCTTCACTAATCATTGGTG 202976 Query 63759 AATGTTTCCCATTTTTAGGATTGAC-ATAGTTGAATAAATCCTCCATCACTTCACTAAAT 63817 |||| ||| | || | |||| ||| | | | || ||| ||||| ||| Sbjct 202975 TATGTACACCAGTAATATCA-TGACGATAATGATACAGGTCACTCATAACTTCTGAGAAT 202917 Query 63818 AGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAA 63877 ||| ||||||| ||| || | || || | || ||||| || || | ||| |||||| Sbjct 202916 GTTTTCTTTGTTTGTTTATGCATGTTGGAGATAGCGATTCTTGCTGCCAAAATAGCATAA 202857 Query 63878 TCCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTAC 63936 || ||||| |||| || || | | |||||| | || || || || | |||||||| || Sbjct 202856 TCAGGATGAAGTGTTGT-CATGTTTGCTGCTGTCTCTGCGGCAAGGTTATCCAATTCAAC 202798 Query 63937 CGTTGTTACACCATTATATATTCCTTGGATAACCTTCA 63974 || | ||||| || |||| ||||||||||| |||| Sbjct 202797 GGTAGAAACACCTTTGTATAAACCTTGGATAACTTTCA 202760 >seq5 Length=1449561 Score = 567 bits (628), Expect = 9e-157 Identities = 1431/2144 (67%), Gaps = 75/2144 (3%) Strand=Plus/Minus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || |||||||| | || ||| ||||| || ||||||| ||| || |||||||| |||| Sbjct 1213746 GCTGGTTTCGTTCTTAAATAATACATCCCTGTTTTTAAACCAAGTTTCCATCCGCGAAAA 1213687 Query 61931 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 61987 || || ||| || | | || | || | ||||| || ||||| | |||||| Sbjct 1213686 TGTATGGAACTACATATTCCGTAAGAT---GGTTTTGCTACATAAATATTAAGAGATTGG 1213630 Query 61988 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATT 62047 |||||| || || ||||| || ||||||||||| | || || |||||| | ||| Sbjct 1213629 GATTGATCAATAAATGCTCCTCTATCTGCAGCCATATCAATGATGTCCTTTTGAGATATT 1213570 Query 62048 TCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTTTGTATTCTGA---AT 62103 ||||| | || ||||| || || |||||||| ||||||| | || | || || Sbjct 1213569 TCCCATACGGTCTTATACAAATC-CTTAATATGATCTGGAATTCCTTTAATATGTTTTAT 1213511 Query 62104 GGATCCACCATCTGCCAT-AATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGG 62162 |||||| || || ||| || | || ||||||||||| || ||| || Sbjct 1213510 AGATCCATTATAATAAATTAATTGGTTTAATAAT-TCATCATTCCACAAATTTAATTCAA 1213452 Query 62163 TTAAAAC-TCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGA 62221 ||| | | ||| || || || || || |||||||| |||||||||||||| | | Sbjct 1213451 CCAAATCGTGTAAA-AGGTGTGGGTTTACCACTTGAAAATCTCCAGACAATACCCGTCTC 1213393 Query 62222 GTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTT 62281 | || | ||| ||||| ||||| | ||||||||||| || ||||||||||||||| Sbjct 1213392 ATATACAAATTTGAAGTATAAGGTTCAAATGACTCATTATTACCAAAAATTTGAGCAGTT 1213333 Query 62282 GATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTA 62341 ||||| || ||||| || || ||||| || |||||| | ||| ||| |||| ||||| Sbjct 1213332 GATGCTGTTGGCATTGGAGCTACCAACAATGAATTTCTTATACCATATTTTCTAATTTTT 1213273 Query 62342 TCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGT 62401 ||||||| | ||||| ||| | || || ||| |||| Sbjct 1213272 TCTTTTAATAATGACCAATCCCATAAATTACTTGGAGTAACTTTCCATAAATCATATTGT 1213213 Query 62402 AGAATACCGTTACTGGCGTAC----GATCCTACATATGTATCGTATGGTCCTTCCTTCTC 62457 | ||| || || | ||| || ||| |||| || || || || || | | || Sbjct 1213212 AAAATGCC---ACGAGA-TACAAGAGAACCTTCATAAGTTTCATAAGGACCATATTCTTC 1213157 Query 62458 AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT 62517 ||||| |||||| || || |||||||| | ||| || ||||| || || || || || Sbjct 1213156 AGCTAATTCACATGAAGCTTCCAATGCACCATGATATATTGTTTCAAATATTTTTTTGTT 1213097 Query 62518 TAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 62577 || ||||| |||| | | | ||||| |||| || ||||| | ||||| || Sbjct 1213096 TAAATCTTTAGCTTGTGAAGAAGCGTAGGGATATCTTAAAAGTATAAAAGTATCTGCCAA 1213037 Query 62578 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62637 ||||||||||||||| || ||||| | |||| || |||| || || || |||| | Sbjct 1213036 TCCTTGAACACCAATGCCAATAGGACGATGTTTCATATTTGATATACGAGTTTCTTCTAA 1212977 Query 62638 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG----ACAATT-----ACTTT 62688 ||||||||||| |||||||| || ||||| | |||| | | | || | ||| Sbjct 1212976 TGGATAATAATTTATATCTATTATCTTATTCAAATTTTTTGTTAAAAGTTTAGTAATTTT 1212917 Query 62689 GACCACATCCTTCAGTTTGA--GAA--AATCAAATCGCCCATCTATT---ACAAACATGT 62741 | | | || | |||| ||| |||| ||| ||| || ||||| | | Sbjct 1212916 GTGAAGTTGTTTAAAATTGAATGAAGTAATCCCATCT----TCTTTTTCAACAAATCTAT 1212861 Query 62742 TCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTA 62801 | || |||| |||| ||| ||||| || || | ||||| | | | |||||| | | Sbjct 1212860 TTAAAGCAATAGATCCCAAGTTACATACAGCGATTTCATTTGAAGAAGAATATTGAACAA 1212801 Query 62802 TCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGT 62861 | || || || | ||| ||| || ||| |||||||||| | ||||||||| || | Sbjct 1212800 TTTCTGTACATAAATTTGAACATTTTATGATTCCTAAATTATTTTGATTACTTTTACGAT 1212741 Query 62862 TACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCG 62921 |||| ||| ||||||| ||| | || || ||||||||||| ||| ||| || Sbjct 1212740 TACAATGATCTTTATAAACCATGTAAGGTGTTCCAGTTTCAATTTGACTTTCACATATTT 1212681 Query 62922 CTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTG 62981 || ||||| | ||| ||||| ||| | | | || | ||||| |||| ||| Sbjct 1212680 TTTGCCAGAGCATTCGTGCCTTGATTTGACTTCTATAACGTTTTTCATTTTCATATTTAA 1212621 Query 62982 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGAC 63041 ||| || ||| || || ||||||||| ||| || || || |||||||| | |||| Sbjct 1212620 CATATAAAGTTTCAAATTCTTCTCCCCAACTATTATCAAGACCTGGACATTCGTGAGGAC 1212561 Query 63042 ACATCAACGACCACTCTCCGTCATCCTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAA 63100 ||||||| ||||| | || | ||| || ||||||||||| | |||||||| ||| Sbjct 1212560 ACATCAATGACCAATAAGAATC-CCTTTCAACACGTTTCATAAATAAATCAGGAACCCAT 1212502 Query 63101 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT---TTCCTGTATTCTTTTTAAGA 63157 | | | ||||| ||| | | | ||||||| | |||||||| || |||||| Sbjct 1212501 AAACCATAAAATAAATCACGAG---CACGTTCCTCTTCCGGACCTGTATTTTTCTTAAGA 1212445 Query 63158 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63217 | | || | |||||| | |||||| ||||| | || || || | |||| || Sbjct 1212444 TTTAAAAATTGAAAAATATCTGCATGCCATGGTTCAATATAAATAGCAAATGCTCCTGGT 1212385 Query 63218 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63277 | ||| ||||| || ||||| | || | ||| || | |||| | |||| ||||| ||| Sbjct 1212384 CTTTTATTTCCACCTTGATCAACATAACGAGCAGTATCATTAAATACTCGTAACATAGGA 1212325 Query 63278 A-TAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT 63336 | |||| ||||| || | ||||| || || ||| | ||| ||||||||||||| Sbjct 1212324 ACTAAT-CCATTTGAAATTCCATTTGTTCCACTAATAAAAGATCCTGTGGCACGAATATT 1212266 Query 63337 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63396 | ||| |||||| | ||| ||||| ||| || |||| || || ||| | || Sbjct 1212265 ATTAACACTTAGACCAACTCCACCTGCACCTTTTGAAATTATAGCACAATTTTTAAGAGT 1212206 Query 63397 ATCATAGATGCCCTCTATACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTT 63455 |||||| || || ||||| |||||||| || |||||| || |||||| |||| || Sbjct 1212205 ATCATAAATACCTTCTATTGAATCATCCACCATTGTTAA-TAAAAAACATGATGACAATT 1212147 Query 63456 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAG 63515 | ||||| |||||| |||| || || || || || ||||||||||| || Sbjct 1212146 GTCCTTTTGGTGTTCCTGCATTATATAATGTTGGTGATGCATGTAAAAACCATTTTTGAG 1212087 Query 63516 AAAGTAGA-TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63574 | | || | || || || |||| | || || ||||| | |||||| || || || Sbjct 1212086 ACA-TACAGTTATATGTTTCAAGTACAGATTCAATATCTTCTCCATGAATACCAACAGCA 1212028 Query 63575 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63634 |||||||| || | || || ||||||||||| || | | || ||| | ||||| || Sbjct 1212027 ACACGCATAAAAAGATGTTGTGGTCTTTCAACAATACAGCTATTAATTCTTAACAAATAT 1211968 Query 63635 GATTTTTCCAAAGTTTTAAAACCAAA-ATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693 ||| |||||| |||||||||||||| | ||| || || |||| || | | || Sbjct 1211967 GATCGTTCCAACGTTTTAAAACCAAAGAAAGTAAAATTGTAA-TCTCTTTTATGATCGAT 1211909 Query 63694 AACCGAGTTGAGTTTATCCTTATATTTGT---TAACTACATCCATGGTAATACTTGAAAT 63750 | || | | | | || |||| ||| | ||| || || | | ||| ||| Sbjct 1211908 TGCTGAATCTAATATTTCTTTATGTTTTTGAATAATTAAATTAGTTTTTTCACT---AAT 1211852 Query 63751 AATAGGAAAATG---TTTCCCATTTTTAGGATTGACATAGTTGAATA-AATC-CTCCATC 63805 ||| ||| ||| ||| |||||| ||| | || || ||| |||| ||||| Sbjct 1211851 AATTGGACTATGTCTTTTTGTATTTTT---ATTTATATTATT--ATACAATCTATCCATA 1211797 Query 63806 ACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCT 63865 |||| ||| | || || |||| ||| || | |||||| | || ||||||| || Sbjct 1211796 ACTTTTGAAAAAACTTCTTCCGTTTGTTTATGCATATTTGAAATAGCAATTCTAGAAGCC 1211737 Query 63866 AGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTG 63925 | |||| ||||||| |||||| ||| | | | || || | ||| ||||| | | Sbjct 1211736 AAAATGCCATAATCAGGATGTATAACAGTTCTATTAGCAGCAACTTCAGCTGCTAAGTTA 1211677 Query 63926 TCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATAAC 63969 || | ||| || || |||||||| ||||||| |||||| | ||| Sbjct 1211676 TCAAGTTCAACAGTAGTTACACCTTTATATAATCCTTGAACAAC 1211633 >seq39 Length=206625 Score = 235 bits (260), Expect = 7e-57 Identities = 545/811 (67%), Gaps = 14/811 (2%) Strand=Plus/Plus Query 32312 TCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGAG---ACATAACTCCCAT 32368 || |||||| ||| |||| | | |||| | ||||||| || ||||||| ||||| Sbjct 48598 TCATTAAAAATCAGCATCCAAGGTAAAAGTACGTTCTTCTTCAGTGCACATAAC-CCCAT 48656 Query 32369 TT-TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATAT 32427 | |||| |||||| || ||||| || ||||| || || ||||| | ||| | | Sbjct 48657 ATCTTTGATATTCAGAAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTCAATTGAAAGGT 48716 Query 32428 TTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAA 32487 || |||||||||| |||||||| |||| |||||||||||| | | ||||| | Sbjct 48717 TTACCATGAAATCAAATGGATTTTTAACCTTATAAATTTTTGGCATGTTTAGTTCAGTTA 48776 Query 32488 TCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 32547 | ||| || ||| |||| || || || ||| | | ||||||| || || | Sbjct 48777 AAAGGTGATCAGCAACATATTCAATGTAGGTACACATTAATCTTGAATTCATACCAATCA 48836 Query 32548 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 32607 | ||| |||||||| |||| | | |||| | ||||| ||| || | | | || | Sbjct 48837 TATCAACAGGAAGAGCATCAGTTAAATATTCCTTCTCAATTTCGACAGCATTTCTAATTA 48896 Query 32608 TAGATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 32665 | || | || ||| || |||| || | | || ||||||| | ||| || Sbjct 48897 TT--TCATGCACACGCTCTACAGACGGTTTATTCTCAAGATAACTAAACATGAGACAAGC 48954 Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725 ||||| | |||| || || ||||| |||||||| || ||| | || || Sbjct 48955 AAAATCTCTATGTAATCCTTCATCTCTGGAGATTAATTCATTTGAATGACACAAACCTGG 49014 Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785 ||||| ||||| ||||| | |||||| || || ||||| || ||||| || || ||||| Sbjct 49015 CATTAATCCACGTTTTTTTAACCAAAAGATTGAAGCAAAAGAACCAGAGAAAAATATTCC 49074 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT-GT--ATCCA 32842 ||| || || ||||| ||||||| | |||||| || || | | || || ||||| Sbjct 49075 TTCAACAGCGGCAAAAGCAATAATACGTTCTCCAAAAGATGCATTCTTATCGTTAATCCA 49134 Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT-ATAGCATTAAAGA 32901 || ||||||||| |||||||| || | | || || ||| | | |||||| || | Sbjct 49135 TCTTAAAGCCCAATCAGCCTTCTTCTTGATA-AATTCAAACTCTGTTAAAGCATTGAAAA 49193 Query 32902 GATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCG 32961 | | ||| |||||| | | || | |||||| ||||| || |||||| || Sbjct 49194 GCTTATTTCTTTCATCAGTGTCACGGATATATGTTTCAATTAACTTGGAATACATCTCAC 49253 Query 32962 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTA 33021 |||||| || || || || ||||||||||| || ||| | | || || | | || | Sbjct 49254 TATGAATATTCTCCATAGCAATTTGAAATCCATAAAAGAAACGTGCTTCAGGGACTTGGA 49313 Query 33022 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 33081 ||||| | |||||| ||| | ||||||||||| || ||||| || || ||||| | Sbjct 49314 CTTCTTTTGAAAATCTTTCAACCAAATTTTCATTGACAATTCCATCGGAAGCAGCAAAGA 49373 Query 33082 ACGCCAATACATGTTTTATAAAATATTTTTC 33112 | || | ||| | |||||| ||| |||| Sbjct 49374 AGGCTAGGACACGAGATATAAAGTATCTTTC 49404 >seq1 Length=6158768 Score = 95.1 bits (104), Expect = 2e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 27514 ACCTAATTCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAAT 27573 ||| | ||||||||| | |||||||||| ||||||||||||| || || || | |||||| Sbjct 2809773 ACCAAGTTCCTTGACTTCAGTTAATGATTTCCAATCCATATTTGCACTACCAATATAAAT 2809832 Query 27574 ATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCC 27615 |||| | | |||| ||||||||||| ||||| | ||| || Sbjct 2809833 ATGTTTTTGATCAACAATCCAAAATTTCGTATGTAAAACACC 2809874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633617664076000