Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq443 113 7e-20 seq1410 86.0 9e-12 >seq443 Length=4751 Score = 113 bits (124), Expect = 7e-20 Identities = 70/74 (95%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 186529 TGGTCCGAGTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACC 186588 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3778 TGGTCGGAGCGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCT-ACC 3836 Query 186589 AGACTGCGCTACAC 186602 || ||||||||||| Sbjct 3837 AGGCTGCGCTACAC 3850 >seq1410 Length=981 Score = 86.0 bits (94), Expect = 9e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 186529 TGGTCCGAGTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACC 186588 ||||| | | ||||||||||||||||||||||| ||| ||||||| ||| |||||| ||| Sbjct 580 TGGTCGGGGCGAGAGGATTCGAACCTCCGACCCTCTGGTCCCAAACCAGATGCGCT-ACC 638 Query 186589 AGACTGCGCTACAC 186602 || |||||| |||| Sbjct 639 AGGCTGCGCCACAC 652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739871260034000