Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq567 98.7 1e-15 >seq567 Length=3368 Score = 98.7 bits (108), Expect = 1e-15 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 32013 GACTCAAGTAGGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCT 32072 ||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 1293 GACCCAATCAGGATTCGAACCTGAGACCTACTGCTTAGAAGGCAGTTGCTCTATCCAGCT 1352 Query 32073 GAGCTATTG 32081 ||||||||| Sbjct 1353 GAGCTATTG 1361 Score = 89.7 bits (98), Expect = 6e-13 Identities = 83/103 (81%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 31214 TCGGGGTGATAGGATTCGAACCTACGGCATCCGCCTCCCAAAGACGGCGCTCT-ACCAAG 31272 |||||||| ||||||||||||| |||| ||| ||||||||| ||||| | ||| | Sbjct 1391 TCGGGGTGGCAGGATTCGAACCTGCGGCCTCCTGCTCCCAAAGCAGGCGCGATAACCGGG 1450 Query 31273 CTGAGCTACACCCCG-AAAGCGGAGAGGGTGGGATTCGAACCC 31314 || ||||||||||| ||||||||||| |||| |||||||| Sbjct 1451 CTACGCTACACCCCGAAAAGCGGAGAGACAGGGACTCGAACCC 1493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622110724426400