Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq33 98.7 7e-16 >seq33 Length=225032 Score = 98.7 bits (108), Expect = 7e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 42512 ATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGA 42571 || || ||||||||||| | ||||| |||||||| ||||| || || |||| Sbjct 4386 ATATTTCCTAAATCACCCACATGTCTAACTTCATCAGTTGGTCCACCATGAGTCTTATTG 4445 Query 42572 AAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGT 42631 || |||||||||||| ||||| ||| |||| |||||||| | || ||| ||| ||| Sbjct 4446 AATGGATTAAAATGTGGTCCAGCAGATATACAACCATTGGTTGAGTCCCCATATTGATGG 4505 Query 42632 ATATGAAAACCGTGATAACCGTACGGTAA 42660 ||||||||||| || |||| | || ||| Sbjct 4506 ATATGAAAACCATGTAAACCTTCCGTTAA 4534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347361937243730