Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq858 89.7 6e-13 >seq858 Length=1962 Score = 89.7 bits (98), Expect = 6e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 40026 GCCTGGAACCCTGTTGATCTTGATGATATGGCATTGCGTCCGTGTCACTGTTTCTTTCAG 40085 ||||||||||| | ||| | || || ||||| ||| || || ||||| | || || Sbjct 1888 GCCTGGAACCCGGCCGATGTGGACGACATGGCGCTGCCGCCCTGCCACTGCCTGTTCCAA 1829 Query 40086 TTCGTTGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAGTTGATGTCTTC 40145 ||| | || | |||| || ||| ||| |||||| || |||| ||||| ||| Sbjct 1828 TTCTTCGTCGCCGACGGAAAGCTGAGCTGCCAGCTGTATCAACGCTCAGCCGATGTGTTC 1769 Query 40146 TTAGGGTTGCCGTTCAATATCGCCTCCTATGCTCTCCTGACGCATAT 40192 ||||| |||||||||| ||||||||||| || || || ||||| || Sbjct 1768 CTAGGGGTGCCGTTCAACATCGCCTCCTACGCCCTGCTCACGCACAT 1722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558054573729600