Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq200 87.8 3e-12 >seq200 Length=12912 Score = 87.8 bits (96), Expect = 3e-12 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 189963 TGGTGCGGATGGTCGGACTCGAACCGACACGCCTAT-GGCGCTAGAACCTAAATCTAGTG 190021 ||||||||||| ||||||||||| ||||||| ||||| ||| ||||| ||| ||| Sbjct 12289 TGGTGCGGATGAGGGGACTCGAACCCCCACGCCTCGCGGCGCCAGATCCTAAGTCTGGTG 12348 Query 190022 CGTCTGCCAATTTCGCCACATCCGC 190046 ||||| |||||| |||||||||||| Sbjct 12349 CGTCTACCAATTCCGCCACATCCGC 12373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720713293492800