Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq395 80.6 8e-11 >seq395 Length=5390 Score = 80.6 bits (88), Expect = 8e-11 Identities = 99/133 (74%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 21313 CCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACC 21372 ||| || |||| |||||||||||| || |||| | ||| | ||||||| || Sbjct 3887 CCCGGTCATCGCCCTGTCGCAGCTCTCGCGTCAGGTGGAAAACCGGGAGGACAAGCGTCC 3946 Query 21373 GATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGA-TGTGATCATGT 21431 | | || |||||||| || || || ||||||||||||||||||| || | |||||| Sbjct 3947 CCAGCTCTCCGACCTGCGGGAATCGGGCTCGATCGAGCAGGACGCCGACTGCG-TCATGT 4005 Query 21432 TCGTGTACCGCGA 21444 |||||||||| || Sbjct 4006 TCGTGTACCGAGA 4018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157107023108340