Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq538 98.7 1e-15 >seq538 Length=3526 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 81130 CCGGTCGAGCCGAAGCCGCCCGCGCCCCGTTCGGTGTCGTCCAGGCTATCGACCTCGACG 81189 ||||| || ||||| |||||||||||||| ||||| ||||||||| |||||||||||| Sbjct 2657 CCGGTTGAACCGAATCCGCCCGCGCCCCGGTCGGTTTCGTCCAGGGCGTCGACCTCGACG 2598 Query 81190 ACCGGCACGATCAGGCACTGTTCGAGGATGATCTGGGCGATGCGATCGCCGGGCTTGATC 81249 | | || | | | | | ||| | |||||||||||||| |||||| |||||||| Sbjct 2597 ATCTGCGCCTGCTCGTAGCGGGCGATCACCATCTGGGCGATGCGGTCGCCGCGCTTGATC 2538 Query 81250 TC 81251 || Sbjct 2537 TC 2536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701347331657600