Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_020080.1 Length=174413 Score E Sequences producing significant alignments: (Bits) Value seq858 86.0 7e-12 >seq858 Length=1962 Score = 86.0 bits (94), Expect = 7e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 39389 GCATGGAACCCTGTTGATCTTGATGATATGGCATTGCGTCCGTGTCACTGTTTCTTTCAG 39448 || |||||||| | ||| | || || ||||| ||| || || ||||| | || || Sbjct 1888 GCCTGGAACCCGGCCGATGTGGACGACATGGCGCTGCCGCCCTGCCACTGCCTGTTCCAA 1829 Query 39449 TTCGTTGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAGTTGATGTCTTC 39508 ||| | || | |||| || ||| ||| |||||| || |||| ||||| ||| Sbjct 1828 TTCTTCGTCGCCGACGGAAAGCTGAGCTGCCAGCTGTATCAACGCTCAGCCGATGTGTTC 1769 Query 39509 TTAGGGTTGCCGTTCAATATCGCCTCCTATGCTCTCCTGACGCATAT 39555 ||||| |||||||||| ||||||||||| || || || ||||| || Sbjct 1768 CTAGGGGTGCCGTTCAACATCGCCTCCTACGCCCTGCTCACGCACAT 1722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557980975394800