Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq567 87.8 2e-12 >seq567 Length=3368 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 156612 CAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 156671 || |||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||| Sbjct 1361 CAATAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 1302 Query 156672 G 156672 | Sbjct 1301 G 1301 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 157686 TTTACGGGGTGTAGCGCAGCTTGGT-AGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGT 157744 ||| |||||||||||| ||| ||| | |||| ||||||||||||| ||| ||||||| Sbjct 1469 TTTTCGGGGTGTAGCGTAGCCCGGTTATCGCGCCTGCTTTGGGAGCAGGAGGCCGCAGGT 1410 Query 157745 TCGAATCCTGTCACCCCGACTTATCAAA 157772 |||||||||| ||||||||| || ||| Sbjct 1409 TCGAATCCTGCCACCCCGACAAATTAAA 1382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547734807219600