Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_020866.1 Length=40231 Score E Sequences producing significant alignments: (Bits) Value seq104 86.0 2e-12 seq96 86.0 2e-12 >seq104 Length=31416 Score = 86.0 bits (94), Expect = 2e-12 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 133 GATTGAAAATCCGCGTGTCGGTGGTTCGAATCCGCCTCCGGGCACCACTT 182 ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 19268 GATTGAAAATCCGCGTGTCGGTGGTTCGAATCCGCCTCCAGGCACCACTT 19317 >seq96 Length=39921 Score = 86.0 bits (94), Expect = 2e-12 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 133 GATTGAAAATCCGCGTGTCGGTGGTTCGAATCCGCCTCCGGGCACCACTT 182 ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 11394 GATTGAAAATCCGCGTGTCGGTGGTTCGAATCCGCCTCCAGGCACCACTT 11443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128614835525460