Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq203 98.7 2e-14 >seq203 Length=12670 Score = 98.7 bits (108), Expect = 2e-14 Identities = 119/154 (77%), Gaps = 6/154 (4%) Strand=Plus/Plus Query 122650 GCCCATCAAGGGCACGGCGCGTCGCGGGGCGAC-ACCCAGCGAG-GACGCTGCGCTGGCC 122707 ||| ||||||||||| ||| |||| |||| | |||| ||| | ||||| || ||||| Sbjct 1930 GCCGATCAAGGGCACC-CGCC-CGCGCGGCGCCGACCCGGCGCGCGACGCCGCCCTGGCG 1987 Query 122708 GCCGAGTTGGCCGCGTGTCCCAAAACCTTTGCCGAGAACCTCATGATCGTCGACCTGGTG 122767 || ||| ||| ||| | |||| | ||||||||||| ||||||||||||||| || Sbjct 1988 GCGGAGCTGGTCGCCAGCGCCAAGGACCGGGCCGAGAACCTGATGATCGTCGACCTGATG 2047 Query 122768 CGCAACGACCTGAGCGTGTGCTGCG-CGCCCGGC 122800 |||||||||||| ||| | || ||| ||||||| Sbjct 2048 CGCAACGACCTG-GCGCGGGCGGCGAGGCCCGGC 2080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916053862044590