Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq1162 93.3 2e-14 seq370 93.3 2e-14 >seq1162 Length=1364 Score = 93.3 bits (102), Expect = 2e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 50108 TGGTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCG 50167 ||||||||| ||| ||||||||||| ||||||| |||| |||||||||| |||||||||| Sbjct 894 TGGTTGCGGGGGCAGGATTTGAACCTGCGGCCTTCAGGTTATGAGCCTGACGAGCTACCG 835 Query 50168 AACTGCTCTACTCCGC 50183 |||||| || |||| Sbjct 834 GGCTGCTCCACCCCGC 819 >seq370 Length=5836 Score = 93.3 bits (102), Expect = 2e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 50108 TGGTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCG 50167 ||||||||| ||| ||||||||||| ||||||| |||| |||||||||| |||||||||| Sbjct 1231 TGGTTGCGGGGGCAGGATTTGAACCTGCGGCCTTCAGGTTATGAGCCTGACGAGCTACCG 1172 Query 50168 AACTGCTCTACTCCGC 50183 |||||| || |||| Sbjct 1171 GGCTGCTCCACCCCGC 1156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181599296666220