Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq24 109 4e-19 >seq24 Length=311514 Score = 109 bits (120), Expect = 4e-19 Identities = 194/279 (70%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 19899 TTGATCAGATTGAGTG-GGTTATTAATGAGATTAAAACAAACCCAACATCACGAAGATTA 19957 ||||||| |||| | |||| || || | ||||||| |||||| || |||||| || Sbjct 228647 TTGATCA-ATTGGCTCAGGTTGTTGATCAAATTAAAAATAACCCAGATTCTCGAAGAATA 228705 Query 19958 ATTGTATCAGGTTGGAATCCTCATGATGTTGCAGATGTA---GATTTACCACCTTGCCAT 20014 || |||||| ||||||||| |||| ||| || || | | | || || |||||| Sbjct 228706 ATCTTATCAGCATGGAATCCTTCTGATCTTG---ATTTAATGGTTCTCCCTCCATGCCAT 228762 Query 20015 ACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAGT 20074 || | ||||||| | ||| ||||||| | ||| || || ||||||||||| ||| Sbjct 228763 ACTTTGGTTCAATTTTATGTTCAAGATGGAGAGTTAAGCTGTCAATTGTATCAACGCAGT 228822 Query 20075 GCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCTTTACTTACACACTTA 20134 | || || |||||| ||||| || |||||||| ||||| || | || || || | Sbjct 228823 GGAGATGTAGGACTTGGAGTTCCTTTCAATATTGCTTCTTACTCTCTTCTGACTCATATG 228882 Query 20135 GTTGCATTAGAATGTGGGCTTAATGTTGGTGAGTTTGTT 20173 | ||| | |||||| | | | ||||| |||||| Sbjct 228883 CTAGCAAAAATATGTGGATTGGAAGCAGGTGATTTTGTT 228921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 319004162812310