Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq858 154 2e-32 >seq858 Length=1962 Score = 154 bits (170), Expect = 2e-32 Identities = 184/250 (74%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||||| ||||| || || | ||| ||||| || | |||||| || || || ||||||| Sbjct 1639 GCTCCAGATGGTTCAGATACAGGTGGGCGTCGCCGAAGGTGTGGACGAAATCGCCCGGCT 1698 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 || || || | ||||| ||||| |||||||| | |||| ||| |||||||| | Sbjct 1699 CCAGCCCCACGACCTTGGCCAGCATGTGCGTGAGCAGGGCGTAGGAGGCGATGTTGAACG 1758 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103 | ||||| ||| || || | || | || ||||||||||| |||| ||||||| Sbjct 1759 GCACCCCTAGGAACACATCGGCTGAGCGTTGATACAGCTGGCAGCTCAGCTTTCCGTCGG 1818 Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 | ||| | || ||| ||||| |||||| ||||||||||||||| || || || || | Sbjct 1819 CGACGAAGAATTGGAACAGGCAGTGGCAGGGCGGCAGCGCCATGTCGTCCACATCGGCCG 1878 Query 147164 GGTTCCAGGC 147173 |||||||||| Sbjct 1879 GGTTCCAGGC 1888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583474798584000