Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq15 812 0.0 seq5 672 0.0 seq39 268 1e-66 >seq15 Length=622252 Score = 812 bits (900), Expect = 0.0 Identities = 1487/2159 (69%), Gaps = 33/2159 (2%) Strand=Plus/Minus Query 68364 CTTATCCAATGTAAACTGAATGGG-TGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422 |||||| | ||||||| ||| | | | | || ||| |||| | || || ||||| | Sbjct 204909 CTTATCAACGGTAAACTTAATAGCATCAACA-GCTGGTCTTGTTCTTAAGTAATACATTC 204851 Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482 | || || | ||| | ||||||| | |||||||||| | | || ||| ||| Sbjct 204850 CAGTCTTTAAACCACGTTTCCATCCATGGAAATGCATAGAACTACATACGGCATATGTTG 204791 Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542 | | |||| ||||| ||| | |||||| |||||| ||| ||||||| | ||| || | Sbjct 204790 GTTTTGCTACATGAAGATTAAGTGATTGAGATTGATCAATGTAAGCTCCACGATCAGCAG 204731 Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATAT 68602 |||| | || ||| |||||||| ||||||||||| ||||||| ||| | ||||||| Sbjct 204730 CCATCTCAATGATATCCTTTTGAGAAATTTCCCAAACAGTCTTATAAAGTTCCTTGATAT 204671 Query 68603 CATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGA 68659 ||| | | | |||||||||| || ||| || ||||||||| |||| | | Sbjct 204670 GTGTTGGTATTCCAGCGATATTTTGAATTGAACCATTATTTGATATAATTTCATTCATAA 204611 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 || ||| ||||||| || || | ||| || |||| ||||| |||||||| |||| Sbjct 204610 CTTCTTCACTCCACAAGTTAAGGTCAATCAAATCTTTAAGAAGATGAGGATTAACAATTT 204551 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 | || || ||||| | || | ||| || | |||||| ||||||||||| | ||||| Sbjct 204550 GGAAGTCTCCAGAGAGAACACGACGTGTAAATATATTAGAAGTATATGGTTCAATAGATT 204491 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 ||||||| || |||||||| ||||| || ||||||||||| || || | || | || Sbjct 204490 CATTATTCCCTAGAATTTGGGCAGTAGAAGCAGTTGGCATTGGAGCTAATAAAAGGGAAT 204431 Query 68840 TTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATG 68899 |||| | |||||| | ||||| || || | | ||||||||| | | | || Sbjct 204430 TTCTTACACCATGCTTGGCAATTTTTTCCTTCAATTTAGCCCAATCCCATAAGTTACTTG 204371 Query 68900 GTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATG 68959 || |||||||| | ||| ||||||| |||||| ||| | |||||||| ||||| Sbjct 204370 GTGTTACATTCCACATATCATATTGTAAAATTCCTTTAGAAACTGGTGATCCATGATATG 204311 Query 68960 TTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAA 69019 ||||||| ||||| |||| |||||| ||| || ||||| || || || | ||||| Sbjct 204310 TTTCATATGGTCCATCCTTAGCAGCTAATTCGCAGGAAGCCTCCAAAGCTCCATGATAAA 204251 Query 69020 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATC-GAATGGATAATGT 69078 | ||||| ||||| |||||||| || |||| || | || || ||||||||| Sbjct 204250 TAGTTTCAAAAATTTTCTTATTAAGTTCTTTGGCC-CGAGGAGATGTGAATGGATATCTC 204192 Query 69079 AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTA 69138 | ||| ||||| ||| || ||||| ||||| ||||| || || || | |||||| Sbjct 204191 ATAAGCATAAAACAATCAGCTAATCCTTGAACACCAATTCCAATGGGGCGATGTCTAAAG 204132 Query 69139 TTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTT 69198 ||||| | | || || || | |||||||||||| | ||| ||||||||||| | |||| Sbjct 204131 TTTGATTTCTTTGCCTCAGGTACAGGATAATAATTGACATCAATAATTTTATTCAAATTT 204072 Query 69199 CGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT-------CCATC 69251 | | | ||| || | |||| ||||| |||| | | || Sbjct 204071 TTAGCAAGAATCTTAGAAACAAGATGAAGTTGATTAAAATTAAATGATGGTTGCCCTTTC 204012 Query 69252 T----AT-AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTA 69306 | || ||| || |||||| ||| | ||| ||| ||||||||| || || |||| Sbjct 204011 TCAATATCAACGAATCTATTCAATGCAATTGATCCTAAATTACAAACAGCAACTTCATCT 203952 Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366 | | ||||| | || || ||||| |||||| |||||| || || |||| ||| Sbjct 203951 GGAGCACAATATTCAACAATTTCAGTACAAAGATTAGAACATTTAATTGTTCCCAAGTTT 203892 Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426 || |||||||| ||| | ||||| |||||||||| ||| | ||||| |||||||| Sbjct 203891 TGTTGATTACTTTTTCTATTACAATGATCCTTGTAAACCATATATGGAGTTCCAGTTTCT 203832 Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGC 69486 || ||| ||| ||| || ||||| |||||||| || ||| | |||||||| Sbjct 203831 ATTTGACTTTCACAAATCTTTTGCCAAATAACCCTAGCCTTGATTTGTTTTCTGTAACGC 203772 Query 69487 TTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAAT 69546 ||||| | ||||| | ||| || | ||| |||||||| |||||| ||| || ||| Sbjct 203771 TTCTCAGTCTCATACTTTGTGTACAATTTTTCAAATTCATCCCCCCAACAATCTTCTAAT 203712 Query 69547 CCAGGACATTCATTTGGACACATCAATGACCACACATCA-TCATCCTTAACTCGTTTCAT 69605 || |||||||||| ||||||||||||||||| | || | || | | ||| |||||||| Sbjct 203711 CCTGGACATTCATGAGGACACATCAATGACCA-ATATGAATCTTTTTCAACACGTTTCAT 203653 Query 69606 AAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTC 69664 ||| | ||| |||| ||| | | | ||| || | ||| | | | | ||||| || Sbjct 203652 AAACAAATCAGGAACCCATA-AACCATAGAATAAATCACGAGCACGTTCCTCTTCTGGTC 203594 Query 69665 CTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 69724 |||||||||| |||||||| | ||| ||||||||||| | |||||||||||| | ||| | Sbjct 203593 CTGTATTTTTCTTAAGATCCAAAAATTCCATAATATCTGCATGCCATGGTTCCAAATAAA 203534 Query 69725 TCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTAT 69784 | || | |||| |||| |||||||| || ||||| | ||||| ||||| || || Sbjct 203533 TTGCAAAAGCTCCAGGTCTCTTATTTCCACCTTGATCAACATATCTTGCAGTATTGTTGA 203474 Query 69785 AGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTC 69844 | ||||||| ||| || | | ||||| ||| | ||||| |||||| |||| | || Sbjct 203473 AAACTCTCAACATTGGTACCAATCCATTTGATGTTCCATTAGTTCCACCAATAAATGATC 203414 Query 69845 CTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAG 69904 | | || |||||| | || | || || || ||||| || ||| || |||| || Sbjct 203413 CATTGGCACGAATACAATGAACATTTAATCCAATACCTCCAGCAGATTTTGAAATTAAAG 203354 Query 69905 CACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA-TGTTAAGAAGA 69963 |||| |||||||||| ||||| || || || || ||| | || |||||| ||| Sbjct 203353 CACATTGTTTCAATGTATCATAAATCCCTTCAATAGAATCTCCAGCCATTGTTAATAAG- 203295 Query 69964 AAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGA 70023 ||||| ||||| ||| || | | ||||| |||||||||| ||| ||||| || || Sbjct 203294 AAACATGAAGACAATTGTGGACGAGTTGTTCCTGCATTAAATAGTGTTGGAGAAGCATGT 203235 Query 70024 GTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGA 70083 || |||||||| | || | | |||||||||||| ||| |||| || ||||| | Sbjct 203234 GTAAACCATTTCTGTGACATAAAATTGTATGTTTCGATAACTGAATCAATATCTTCTCCA 203175 Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143 ||||| || | || || | ||| | | ||| || |||| ||| | |||| || || Sbjct 203174 TGAATACCAACAGCAACTCTCATAAGTAAATGTTGTGGTCTTTCAGCAATTTTCTTGTTG 203115 Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCT 70203 ||||| || || || || ||| | |||||| || ||||| | ||| ||||||| Sbjct 203114 ATTTTTAAAAGATAAGAACGTTCTAAAGTTTTGAATCCAAAGAATGAGTAGTCAAAGTCT 203055 Query 70204 CTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACA 70263 || || |||| ||| ||||||| ||||| || || ||| || || || | Sbjct 203054 CTGTCATAAACGATAGCAGAATTAAGTTTGTCAGCATGTTTTTGAATTACAT---TGTAT 202998 Query 70264 GTAGGTGAGATAATC---GGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAA 70320 || | ||||| || | || |||| | || || | ||| | | | Sbjct 202997 GTTTCTTCACTAATCATTGGTGTATGTACACCAGTAATATCATGACGATAATGATACAGG 202938 Query 70321 TCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATT 70380 || ||| || || ||| ||| ||||||| || || | || || || || ||| Sbjct 202937 TCACTCATAACTTCTGAGAATGTTTTCTTTGTTTGTTTATGCATGTTGGAGATAGCGATT 202878 Query 70381 CTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAG-TAGCTGCTATTTCCGC 70439 || ||||| | ||||||||| |||||||| |||| || || | | |||||| | || || Sbjct 202877 CTTGCTGCCAAAATAGCATAATCAGGATGAAGTGTTGT-CATGTTTGCTGCTGTCTCTGC 202819 Query 70440 AGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCA 70498 || | |||| ||||| | || | ||| || || |||| ||||| |||||||||| Sbjct 202818 GGCAAGGTTATCCAATTCAACGGTAGAAACACCTTTGTATAAACCTTGGATAACTTTCA 202760 >seq5 Length=1449561 Score = 672 bits (744), Expect = 0.0 Identities = 1449/2137 (68%), Gaps = 61/2137 (3%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || ||||| || | || ||| ||||| || ||||| | ||| || |||||||| ||| Sbjct 1213746 GCTGGTTTCGTTCTTAAATAATACATCCCTGTTTTTAAACCAAGTTTCCATCCGCGAAAA 1213687 Query 68455 TGCAT---ACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGA 68511 || || ||| || | | || | ||| | |||| || |||||| | ||||| Sbjct 1213686 TGTATGGAACTACATATTCCGTAAGA---TGGTTTTGCTACATAAATATTAAGAGATTGG 1213630 Query 68512 CTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATT 68571 |||||| || || |||||||||||||| ||||| | || || |||||||| ||| Sbjct 1213629 GATTGATCAATAAATGCTCCTCTATCTGCAGCCATATCAATGATGTCCTTTTGAGATATT 1213570 Query 68572 TCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATG 68628 ||||| | |||||| | | | || |||| |||||||| | | ||| || || Sbjct 1213569 TCCCATACGGTCTTATACAAATCCTTAATATGATCTGGAATTCCTTTAATATGTTTTATA 1213510 Query 68629 GATCCACCATCGGATAT-AATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGT 68687 |||||| || | || |||| || | || |||||||||||||| ||| || Sbjct 1213509 GATCCATTATAATAAATTAATTGGTTTAATAAT-TCATCATTCCACAAATTTAATTCAAC 1213451 Query 68688 TAAAAC-TCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAG 68746 ||| | | ||| || || || || || | |||||| || ||||| || || | | Sbjct 1213450 CAAATCGTGTAAA-AGGTGTGGGTTTACCACTTGAAAATCTCCAGACAATACCCGTCTCA 1213392 Query 68747 TGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTG 68806 | || | ||| ||||| ||||| | || |||||||| || | |||||||||||||| Sbjct 1213391 TATACAAATTTGAAGTATAAGGTTCAAATGACTCATTATTACCAAAAATTTGAGCAGTTG 1213332 Query 68807 ATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTAT 68866 |||| |||||||| || || ||||| || |||||| | ||||| | || | ||||| | Sbjct 1213331 ATGCTGTTGGCATTGGAGCTACCAACAATGAATTTCTTATACCATATTTTCTAATTTTTT 1213272 Query 68867 CTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTA 68926 |||||| | ||||||||| | || | ||| ||| ||||| | ||| ||||||| Sbjct 1213271 CTTTTAATAATGACCAATCCCATAAATTACTTGGAGTAACTTTCCATAAATCATATTGTA 1213212 Query 68927 GAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTA 68986 ||| || | | || || || | ||| ||||||||||| || | | |||||||| Sbjct 1213211 AAATGCCACGAGATACAAGAGAACCTTCATAAGTTTCATAAGGACCATATTCTTCAGCTA 1213152 Query 68987 GTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT 69046 |||||| || || |||||||| | ||| |||||||| || || || || || | || Sbjct 1213151 ATTCACATGAAGCTTCCAATGCACCATGATATATTGTTTCAAATATTTTTTTGTTTAAAT 1213092 Query 69047 CTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCT 69106 ||| |||| | | | || | ||||| |||||| ||||| | |||||||||||| | Sbjct 1213091 CTTTAGCTTGTGAAGAAGCGTAGGGATATCTTAAAAGTATAAAAGTATCTGCCAATCCTT 1213032 Query 69107 GAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGAT 69166 |||| ||||| || ||||| | |||| || ||||||| | || |||| | |||| Sbjct 1213031 GAACACCAATGCCAATAGGACGATGTTTCATATTTGATATACGAGTTTCTTCTAATGGAT 1212972 Query 69167 AATAATTAATATCTATAATTTTATTAAGATTTCG--------GACTACTACTTTAACCAC 69218 ||||||| |||||||| || ||||| | |||| | || || ||| | Sbjct 1212971 AATAATTTATATCTATTATCTTATTCAAATTTTTTGTTAAAAGTTTAGTAATTTTGTGAA 1212912 Query 69219 GTCCTTTAGT-TTGA--GAA--AATCAAATCGTCCATCTATAACAAACATATTCAGTGCT 69273 || |||| |||| ||| |||| ||| || | | |||||| |||| | || Sbjct 1212911 GTTGTTTAAAATTGAATGAAGTAATCCCATCTTCTTTTTC-AACAAATCTATTTAAAGCA 1212853 Query 69274 ACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTA 69333 | |||| | | ||||| || || | ||||| ||| | |||||| | || |||||| Sbjct 1212852 ATAGATCCCAAGTTACATACAGCGATTTCATTTGAAGAAGAATATTGAACAATTTCTGTA 1212793 Query 69334 CATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCG 69393 |||| ||| |||||| || | || | ||| | |||||||| || ||||| Sbjct 1212792 CATAAATTTGAACATTTTATGATTCCTAAATTATTTTGATTACTTTTACGATTACAATGA 1212733 Query 69394 TCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAA 69453 || || |||| || | || || ||||||||||| ||| ||| || || ||| Sbjct 1212732 TCTTTATAAACCATGTAAGGTGTTCCAGTTTCAATTTGACTTTCACATATTTTTTGCCAG 1212673 Query 69454 ACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGC 69513 | | | || || ||| | | ||||| || || |||||||||| ||||| Sbjct 1212672 AGCATTCGTGCCTTGATTTGACTTCTATAACGTTTTTCATTTTCATATTTAACATATAAA 1212613 Query 69514 CGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAAT 69573 ||| ||||| ||||||||| || ||| | || |||||||| | |||||||||||| Sbjct 1212612 GTTTCAAATTCTTCTCCCCAACTATTATCAAGACCTGGACATTCGTGAGGACACATCAAT 1212553 Query 69574 GACCACACATCATCATCCTT--AACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTA 69631 ||||| | ||| |||| ||| ||||||||||||| ||| |||| ||| | | | Sbjct 1212552 GACCAATAAGAATC--CCTTTCAACACGTTTCATAAATAAATCAGGAACCCATAAACCAT 1212495 Query 69632 TAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACT 69691 ||| | ||| | | | | ||||| ||||||||||| ||||||| | ||| | Sbjct 1212494 AAAATAAATCACGAGCACGTTCCTCTTCCGGACCTGTATTTTTCTTAAGATTTAAAAATT 1212435 Query 69692 CCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTC 69751 | |||||| | |||||||||||| | ||| || || | |||| |||| |||||||| Sbjct 1212434 GAAAAATATCTGCATGCCATGGTTCAATATAAATAGCAAATGCTCCTGGTCTTTTATTTC 1212375 Query 69752 CTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAA-TAATACCA 69810 | || ||||| | || | ||||| | |||| | |||| | ||| |||| |||| ||| Sbjct 1212374 CACCTTGATCAACATAACGAGCAGTATCATTAAATACTCGTAACATAGGAACTAAT-CCA 1212316 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 || || | |||||||||||| |||| || |||| | || ||||||||| ||| | | Sbjct 1212315 TTTGAAATTCCATTTGTTCCACTAATAAAAGATCCTGTGGCACGAATATTATTAACACTT 1212256 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 ||||| | ||| ||||| ||| || |||| ||||||| ||| | || ||||| ||| Sbjct 1212255 AGACCAACTCCACCTGCACCTTTTGAAATTATAGCACAATTTTTAAGAGTATCATAAATA 1212196 Query 69931 CCCTCTATGCTATCATCTATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGTAT 69989 || ||||| |||||| | || |||||| || |||||| |||| ||| | | Sbjct 1212195 CCTTCTATTGAATCATCCACCATTGTTAATAA-AAAACATGATGACAATTGTCCTTTTGG 1212137 Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGAT 70048 ||||| |||||| ||||||| || ||||| || |||||||||| ||| | ||| | Sbjct 1212136 TGTTCCTGCATTATATAATGTTGGTGATGCATGTAAAAACCATTTTTGAGACATACAG-T 1212078 Query 70049 TGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCA 70108 | |||||||||| | ||||| ||||| |||||| || | || |||||||| | Sbjct 1212077 TATATGTTTCAAGTACAGATTCAATATCTTCTCCATGAATACCAACAGCAACACGCATAA 1212018 Query 70109 ACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 | | ||| || |||| ||| || | |||| ||| | |||| |||||| ||||| Sbjct 1212017 AAAGATGTTGTGGTCTTTCAACAATACAGCTATTAATTCTTAACAAATATGATCGTTCCA 1211958 Query 70169 GAGTTTTAAACCCAAA-ATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTT 70227 |||||||| ||||| | ||| || || ||||||| | | || | |||| | Sbjct 1211957 ACGTTTTAAAACCAAAGAAAGTAAAATTGTAA-TCTCTTTTATGATCGATTGCTGAATCT 1211899 Query 70228 AGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAGGT------GAGATAATCGG- 70280 | | | || |||| ||| | | || || | | ||| | ||||| || Sbjct 1211898 AATATTTCTTTATGTTT-TTGAATA-----ATTAAATTAGTTTTTTCACTAATAATTGGA 1211845 Query 70281 --AGATCGTTTACCATTTTTAGGATTAACATAGTTGAATA-AATCT-TCCATTACATCAC 70336 | || ||| |||||| ||| | || || ||| ||||| ||||| || | Sbjct 1211844 CTATGTCTTTTTGTATTTTT---ATTTATATTATT--ATACAATCTATCCATAACTTTTG 1211790 Query 70337 TAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAG 70396 ||| | || || |||| || || | |||||| || || ||||| | || | ||| Sbjct 1211789 AAAAAACTTCTTCCGTTTGTTTATGCATATTTGAAATAGCAATTCTAGAAGCCAAAATGC 1211730 Query 70397 CATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATT 70456 |||| ||||||||| ||| | | |||| || | ||| || ||||| |||| | || Sbjct 1211729 CATAATCAGGATGTATAACAGTTCTATTAGCAGCAACTTCAGCTGCTAAGTTATCAAGTT 1211670 Query 70457 CTATAGTTGTAACTCCGTTATATAGCCCTTGAATAAC 70493 | | ||| || || || ||||||| ||||||| ||| Sbjct 1211669 CAACAGTAGTTACACCTTTATATAATCCTTGAACAAC 1211633 >seq39 Length=206625 Score = 268 bits (296), Expect = 1e-66 Identities = 581/853 (68%), Gaps = 15/853 (2%) Strand=Plus/Plus Query 39264 TGAT-TCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTT--GTG-ACATAACT 39319 |||| || |||||| ||| |||| || | |||| | ||||||| ||| ||||||| Sbjct 48593 TGATATCATTAAAAATCAGCATCCAAGGTAAAAGTACGTTCTTCTTCAGTGCACATAAC- 48651 Query 39320 CCCATTT-TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGA 39378 ||||| | |||| |||||| ||| || || || ||||| || || ||||| | ||| Sbjct 48652 CCCATATCTTTGATATTCAGAAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTCAATTGA 48711 Query 39379 TATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTC 39438 | ||| ||||||||||||| ||||| | | ||||| ||||| | || ||| Sbjct 48712 AAGGTTTACCATGAAATCAAATGGATTTTTAACCTTATAAATTTTTGGCATGTTTAGTTC 48771 Query 39439 TGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCC 39498 | | | ||| |||||| |||| ||||| || ||| | | ||||||| || Sbjct 48772 AGTTAAAAGGTGATCAGCAACATATTCAATGTAGGTACACATTAATCTTGAATTCATACC 48831 Query 39499 TATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGT 39558 || | | ||| || ||||| || |||| | | || || || || || || || | | | Sbjct 48832 AATCATATCAACAGGAAGAGCATCAGTTAAATATTCCTTCTCAATTTCGACAGCATTTCT 48891 Query 39559 TATTATCG-ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGC 39617 ||||| ||| || ||| || |||| || | | || ||||||| | | Sbjct 48892 AATTATTTCATGC-ACACGCTCTACAGACGGTTTATTCTCAAGATAACTAAACATGAGAC 48950 Query 39618 AGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTC 39677 | || || || | ||||| || |||||||| |||||||| || ||| | | Sbjct 48951 AAGCAAAATCTCTATGTAATCCTTCATCTCTGGAGATTAATTCATTTGAATGACACAAAC 49010 Query 39678 CAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGA 39737 | ||||||| ||||| ||||| | |||||| || | ||||||||| ||||| || || | Sbjct 49011 CTGGCATTAATCCACGTTTTTTTAACCAAAAGATTGAAGCAAAAGAACCAGAGAAAAATA 49070 Query 39738 TGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT-GT--A 39794 | ||||| || || ||||| |||| || | ||||| || || || |||| || | Sbjct 49071 TTCCTTCAACAGCGGCAAAAGCAATAATACGTTCTCCAAAAGATGCATTCTTATCGTTAA 49130 Query 39795 TCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT-ATAGCATTA 39853 |||| | ||||||||||| |||||||| | | || || | | | | |||||| Sbjct 49131 TCCATCTTAAAGCCCAATCAGCCTTCTTCTTGATA-AATTCAAACTCTGTTAAAGCATTG 49189 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 || || | || | |||||||| | || | |||||| || |||||| |||||| Sbjct 49190 AAAAGCTTATTTCTTTCATCAGTGTCACGGATATATGTTTCAATTAACTTGGAATACATC 49249 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || ||| || || || || || || |||||||| ||||| | | |||||||| | | Sbjct 49250 TCACTATGAATATTCTCCATAGCAATTTGAAATCCATAAAAGAAACGTGCTTCAGGGACT 49309 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || ||| |||||||||| ||||||||||||| || |||||||| ||| ||| Sbjct 49310 TGGACTTCTTTTGAAAATCTTTCAACCAAATTTTCATTGACAATTCCATCGGAAGCAGCA 49369 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATT-CCAGTC 40092 || || || | ||| | ||||| ||| |||||| | ||| ||| ||| |||||| Sbjct 49370 AAGAAGGCTAGGACACGAGATATAAAGTATCTTTCATTGTCAGTC-ATTGATTCCCAGTC 49428 Query 40093 ATTGATATCTTTT 40105 | ||||||||| Sbjct 49429 TCTCATATCTTTT 49441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686893258688400