Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_028834.1 Length=48216 Score E Sequences producing significant alignments: (Bits) Value seq1410 80.6 8e-11 seq443 80.6 8e-11 >seq1410 Length=981 Score = 80.6 bits (88), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 36269 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTGCCA 36328 ||||||| | ||||||||||||| ||||||||| ||||||| |||||||||| ||| Sbjct 580 TGGTCGGGGCGAGAGGATTCGAACCTCCGACCCTCTGGTCCCAAACCAGATGCGCTACCA 639 Query 36329 GACTGCGCTACACTCCG 36345 | |||||| |||| ||| Sbjct 640 GGCTGCGCCACACCCCG 656 >seq443 Length=4751 Score = 80.6 bits (88), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 36269 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTGCCA 36328 ||||||||| ||||||||||||| ||||| ||| ||||||| ||| |||||| ||| Sbjct 3778 TGGTCGGAGCGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTACCA 3837 Query 36329 GACTGCGCTACACTCCG 36345 | ||||||||||| ||| Sbjct 3838 GGCTGCGCTACACCCCG 3854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154166286317160