Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq148 98.7 3e-16 >seq148 Length=19139 Score = 98.7 bits (108), Expect = 3e-16 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 31587 CTGCAGGGAGTCCACCCGCACCTGGTCAGGGTGGTGGA-GCGCGCGATTGAGCTGACCGC 31645 |||||||| || || || | |||||| ||| || || ||| || || |||||||| | Sbjct 8716 CTGCAGGGGGTGCATCCCGATCTGGTCGTGGTCGTCGAAGCG-GCCATCGAGCTGACGCC 8658 Query 31646 CGTGGACTTCAGTGTCCACGAGGGCCTGCGCACCAGGGCCCGCCAGGCCAAGCTGGTGGC 31705 || ||||||| ||| ||||||||||||||| ||| || ||||| | |||||| Sbjct 8657 GGTAGACTTCATGGTCTCCGAGGGCCTGCGCACGGCGGCGCGTCAGGCGGAACTGGTGCG 8598 Query 31706 GGCCGGCGCAAGCCAGACCATGGACTCCCGCCACCT 31741 ||| ||||| |||| ||| || |||| |||||||| Sbjct 8597 GGCGGGCGCCAGCCGGACGCTGAACTCGCGCCACCT 8562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176220212285400