Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq395 86.0 2e-12 >seq395 Length=5390 Score = 86.0 bits (94), Expect = 2e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 34057 TCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGCAGG 34116 ||||||||||||||||||| |||||||||||||||||||| || || || |||||| Sbjct 4018 TCTCGGTACACGAACATGACGCAGTCGGCGTCCTGCTCGATCGAGCCCGATTCCCGCAGG 3959 Query 34117 TCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGACAGC 34176 || || | | || ||||||| | ||| | |||| || |||||||||||| Sbjct 3958 TCGGAGAGCTGGGGACGCTTGTCCTCCCGGTTTTCCACCTGACGCGAGAGCTGCGACAGG 3899 Query 34177 ACGATCACGGGG 34188 |||| || ||| Sbjct 3898 GCGATGACCGGG 3887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160460551026900