Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq15 865 0.0 seq5 661 0.0 seq39 239 6e-58 >seq15 Length=622252 Score = 865 bits (958), Expect = 0.0 Identities = 1505/2167 (69%), Gaps = 49/2167 (2%) Strand=Plus/Minus Query 76772 CTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACC 76831 |||||| | ||||||| ||| | | | || ||| |||| | || || ||||| || Sbjct 204909 CTTATCAACGGTAAACTTAATAGCATCAACAGCTGGTCTTGTTCTTAAGTAATACATTCC 204850 Query 76832 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891 ||| |||| ||| | ||||||| | ||||||||| | | || ||| | || Sbjct 204849 AGTCTTTAAACCACGTTTCCATCCATGGAAATGCATAGAACTACATACGGCATATGTTGG 204790 Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 76951 | |||| ||||| ||| | || ||| |||||| ||| ||||||| | |||||| || Sbjct 204789 TTTTGCTACATGAAGATTAAGTGATTGAGATTGATCAATGTAAGCTCCACGATCAGCAGC 204730 Query 76952 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 77011 ||| | || || |||||||| ||||||||||| ||| || ||| || ||||||| Sbjct 204729 CATCTCAATGATATCCTTTTGAGAAATTTCCCAAACAGTCTTATAAAGTTCCTTGATATG 204670 Query 77012 ATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTAT 77068 ||| | | |||||||||| |||||| || |||||||||| |||| | | Sbjct 204669 TGTTGGTATTCCAGCGATATTTTGAATTGAACCATTATTTGATATAATTTCATTCATAAC 204610 Query 77069 ATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128 || ||| ||||||| || || | ||| || |||| |||||||||||||| ||||| Sbjct 204609 TTCTTCACTCCACAAGTTAAGGTCAATCAAATCTTTAAGAAGATGAGGATTAACAATTTG 204550 Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 || |||||||| | || | ||| || | |||||| ||||||||||| | |||||| Sbjct 204549 GAAGTCTCCAGAGAGAACACGACGTGTAAATATATTAGAAGTATATGGTTCAATAGATTC 204490 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248 ||| || || | |||||| |||||||||||||||||||| || || | || | ||| Sbjct 204489 ATTATTCCCTAGAATTTGGGCAGTAGAAGCAGTTGGCATTGGAGCTAATAAAAGGGAATT 204430 Query 77249 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTT---CCAATCCCA-AAGAT-CT 77303 ||| | |||||| | ||||| || || | |||| ||||||||| ||| | || Sbjct 204429 TCTTACACCATGCTTGGCAATTTTTTCCTTCA---ATTTAGCCCAATCCCATAAGTTACT 204373 Query 77304 GAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTA 77363 ||| |||| ||| | ||| ||||||| |||||| ||| | | |||||||| | Sbjct 204372 T--GGTGTTACATTCCACATATCATATTGTAAAATTCCTTTAGAAACTGGTGATCCATGA 204315 Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423 ||||||||||| ||||| || | |||||| ||| || || ||||| ||||| | | Sbjct 204314 TATGTTTCATATGGTCCATCCTTAGCAGCTAATTCGCAGGAAGCCTCCAAAGCTCCATGA 204255 Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAA 77483 ||||| ||||| ||||| |||||||| || |||| || | | || ||||| Sbjct 204254 TAAATAGTTTCAAAAATTTTCTTATTAAGTTCTTTGGCCCGAGGAGATGTGAATGGATAT 204195 Query 77484 TGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTC 77543 | ||| ||||| ||| |||||||| ||||| ||||| ||||| || | |||||| Sbjct 204194 CTCATAAGCATAAAACAATCAGCTAATCCTTGAACACCAATTCCAATGGGGCGATGTCTA 204135 Query 77544 TTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGA 77603 || || | || || || || | |||||||||||| | || ||||||||||| | | Sbjct 204134 AAGTTTGATTTCTTTGCCTCAGGTACAGGATAATAATTGACATCAATAATTTTATTCAAA 204075 Query 77604 TTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAAT----------CT 77653 ||| || ||| | ||| || | |||| | ||||| |||| || Sbjct 204074 TTTTTAGCAAGAATCTTAGAAACAAGATGAAGTTGATTAAAATTAAATGATGGTTGCCCT 204015 Query 77654 TCCATCTATAACAAACA---TGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTC 77710 | | || ||| ||| | | ||||| || || ||| ||| ||||||||| || || || Sbjct 204014 TTC-TCAATATCAACGAATCTATTCAATGCAATTGATCCTAAATTACAAACAGCAACTTC 203956 Query 77711 ATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAG 77770 || | ||||| | || || ||||| |||||| |||||| || || |||| Sbjct 203955 ATCTGGAGCACAATATTCAACAATTTCAGTACAAAGATTAGAACATTTAATTGTTCCCAA 203896 Query 77771 ATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTCCTTATAAAGAATAAACGGAGTCCCGG 77829 |||||||| || || ||| |||| || ||| ||||| |||| ||| | ||||| || | Sbjct 203895 GTTTTGTTGATTACTTTTTCTATTACAATGA-TCCTTGTAAACCATATATGGAGTTCCAG 203837 Query 77830 TTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTT-- 77887 |||| || || ||| ||| || ||| | || ||||| || || | | ||| Sbjct 203836 TTTCTATTTGACTTTCACAAATCTTTTGCCAAATAACCCTAGCCTTGAT--TTGTTTTCT 203779 Query 77888 GTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATC 77947 ||| ||| |||| | ||||| | || || | |||||||||||| |||||| ||| Sbjct 203778 GTAACGCTTCTCAGTCTCATACTTTGTGTACAATTTTTCAAATTCATCCCCCCAACAATC 203719 Query 77948 ATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCG 78007 || ||||| || ||||||| || |||||||||||||| | ||||| | ||| || Sbjct 203718 TTCTAATCCTGGACATTCATGAGGACACATCAATGACCAATATGAATCTTTTTCAACACG 203659 Query 78008 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||||||||| | |||||| | ||||| | || |||| ||| || | | | ||||| Sbjct 203658 TTTCATAAACAAATCAGGAACCCATAAACCATAGAATAAATCACGAGCACGTTCCTCTTC 203599 Query 78068 ATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 78127 ||||||||| || |||||||| | ||| ||||||||||| | |||||||||||| | Sbjct 203598 TGGTCCTGTATTTTTCTTAAGATCCAAAAATTCCATAATATCTGCATGCCATGGTTCCAA 203539 Query 78128 ATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTT 78187 ||| ||||| | | ||||||||| ||||| || || ||||| | |||||| || || || Sbjct 203538 ATAAATTGCAAAAGCTCCAGGTCTCTTATTTCCACCTTGATCAACATATCTTGCAGTATT 203479 Query 78188 ATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 || |||||||||||||||| | | || || ||||||||||| |||||| |||| | Sbjct 203478 GTTGAAAACTCTCAACATTGGTACCAATCCATTTGATGTTCCATTAGTTCCACCAATAAA 203419 Query 78248 ACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATAT 78307 |||| | || |||||| | || || || || ||||| || || || || Sbjct 203418 TGATCCATTGGCACGAATACAATGAACATTTAATCCAATACCTCCAGCAGATTTTGAAAT 203359 Query 78308 TAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATC--ATGTTA 78365 || ||| || ||||||||||||| || || || || ||| || |||| | ||||| Sbjct 203358 TAAAGCACATTGTTTCAATGTATCATAAATCCCTTCAATAGAATC-TCCAGCCATTGTTA 203300 Query 78366 AGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGAT 78425 | ||| ||||| ||||| ||| || || |||||||||||||||| ||| ||||| Sbjct 203299 ATAAG-AAACATGAAGACAATTGTGGACGAGTTGTTCCTGCATTAAATAGTGTTGGAGAA 203241 Query 78426 GCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC 78485 ||||| ||||||||||| | || | | |||||||||||| ||| |||| || || || Sbjct 203240 GCATGTGTAAACCATTTCTGTGACATAAAATTGTATGTTTCGATAACTGAATCAATATCT 203181 Query 78486 CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTA 78545 | |||||| || || || || | ||| | | ||| || ||||||||| | | || Sbjct 203180 TCTCCATGAATACCAACAGCAACTCTCATAAGTAAATGTTGTGGTCTTTCAGCAATTTTC 203121 Query 78546 TTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 78605 || || ||||| || | || || ||| |||||||| || ||||| | ||| | Sbjct 203120 TTGTTGATTTTTAAAAGATAAGAACGTTCTAAAGTTTTGAATCCAAAGAATGAGTAGTCA 203061 Query 78606 AAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATC--TTTGTATTTG-GTAACAATA 78662 |||||||| || |||| ||| ||||||| ||||| || ||| |||| | ||| | Sbjct 203060 AAGTCTCTGTCATAAACGATAGCAGAATTAAGTTTGTCAGCATGTTTTTGAATTACATTG 203001 Query 78663 TCCATGACAGTAGTTGA--AATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGT 78720 | ||| | || | ||| || || | |||||||| | || || | ||| | Sbjct 203000 T--ATG---TTTCTTCACTAATCATTGGTGTATGTACACCAGTAATATCATGACGATAAT 202946 Query 78721 TAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATA 78780 | | | || ||| || || ||| ||| ||||||| || || | || || | Sbjct 202945 GATACAGGTCACTCATAACTTCTGAGAATGTTTTCTTTGTTTGTTTATGCATGTTGGAGA 202886 Query 78781 CAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAG-TGGCTGCT 78839 ||| |||||||| || | |||||||||||||||||| |||| || || | | |||||| Sbjct 202885 TAGCGATTCTTGCTGCCAAAATAGCATAATCAGGATGAAGTGTTGT-CATGTTTGCTGCT 202827 Query 78840 ATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATA 78899 | ||||| || | |||| || || | || | || || || |||| ||||| ||| Sbjct 202826 GTCTCTGCGGCAAGGTTATCCAATTCAACGGTAGAAACACCTTTGTATAAACCTTGGATA 202767 Query 78900 ACTTTCA 78906 ||||||| Sbjct 202766 ACTTTCA 202760 >seq5 Length=1449561 Score = 661 bits (732), Expect = 0.0 Identities = 1450/2135 (68%), Gaps = 57/2135 (3%) Strand=Plus/Minus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 || ||||| || | || ||| ||||| || ||||||| ||| || |||||||| ||| Sbjct 1213746 GCTGGTTTCGTTCTTAAATAATACATCCCTGTTTTTAAACCAAGTTTCCATCCGCGAAAA 1213687 Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922 || ||| | | | ||| || | |||| || |||||| | || || | Sbjct 1213686 TGTATGGAACTACATATTCCGTAAGATGGTTTTGCTACATAAATATTAAGAGATTGGGAT 1213627 Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982 ||||| || || ||||||||||| || ||||| | || ||| |||||||| |||||| Sbjct 1213626 TGATCAATAAATGCTCCTCTATCTGCAGCCATATCAATGATGTCCTTTTGAGATATTTCC 1213567 Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG---TTTGTATTTTGAATGGAA 77039 || | || || | | | || |||| |||||||| || ||| || || || Sbjct 1213566 CATACGGTCTTATACAAATCCTTAATATGATCTGGAATTCCTTTAATATGTTTTATAGAT 1213507 Query 77040 CCACCATCTGATAT-AATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAA 77098 ||| || | || ||||| || | || |||||||||||||| || || || Sbjct 1213506 CCATTATAATAAATTAATTGGTTTAATAAT-TCATCATTCCACAAATTTAATTCAACCAA 1213448 Query 77099 AAC-TCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGT 77157 | | | ||| || || || || || | |||||| |||||||||||||| | | | | Sbjct 1213447 ATCGTGTAAA-AGGTGTGGGTTTACCACTTGAAAATCTCCAGACAATACCCGTCTCATAT 1213389 Query 77158 AAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAG 77217 | | ||| ||||| ||||| | || ||||| || || |||||||||||||| || | Sbjct 1213388 ACAAATTTGAAGTATAAGGTTCAAATGACTCATTATTACCAAAAATTTGAGCAGTTGATG 1213329 Query 77218 CAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTT 77277 | |||||||| || || ||||| || |||||| | ||||| | |||| ||||| |||| Sbjct 1213328 CTGTTGGCATTGGAGCTACCAACAATGAATTTCTTATACCATATTTTCTAATTTTTTCTT 1213269 Query 77278 TTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAA 77337 ||| || ||||||||| | || || ||| | ||| | ||| ||||||| || Sbjct 1213268 TTAATAATGACCAATCCCATAAATTACTTGGAGTAACTTTCCATAAATCATATTGTAAAA 1213209 Query 77338 TTCCGTTACTAG---CATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTA 77394 | || || || || || || | ||| ||||||||||| || | | |||||||| Sbjct 1213208 TGCC---ACGAGATACAAGAGAACCTTCATAAGTTTCATAAGGACCATATTCTTCAGCTA 1213152 Query 77395 GTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT 77454 |||||| ||||||||||| || | ||| |||||||| || || || || || | || Sbjct 1213151 ATTCACATGAAGCTTCCAATGCACCATGATATATTGTTTCAAATATTTTTTTGTTTAAAT 1213092 Query 77455 CTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCT 77514 ||| |||| | | | | ||||| |||||| ||||| | |||||| ||||| | Sbjct 1213091 CTTTAGCTTGTGAAGAAGCGTAGGGATATCTTAAAAGTATAAAAGTATCTGCCAATCCTT 1213032 Query 77515 GAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGAT 77574 |||| ||||| |||||||| | |||| || |||| || || || |||| | |||| Sbjct 1213031 GAACACCAATGCCAATAGGACGATGTTTCATATTTGATATACGAGTTTCTTCTAATGGAT 1212972 Query 77575 AATAATTAATGTCTATAATTTTATTGAGATTTCT----AACA----ACTACTTTAACCAC 77626 ||||||| || ||||| || ||||| | |||| | || | | || ||| | Sbjct 1212971 AATAATTTATATCTATTATCTTATTCAAATTTTTTGTTAAAAGTTTAGTAATTTTGTGAA 1212912 Query 77627 GTCCTTTAG--TTTAA-GAA--AATCAAATCTTCCATCTATAACAAACATGTTCAAAGCT 77681 || |||| || || ||| |||| |||||| | | |||||| | || ||||| Sbjct 1212911 GTTGTTTAAAATTGAATGAAGTAATCCCATCTTCTTTTTC-AACAAATCTATTTAAAGCA 1212853 Query 77682 ATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTA 77741 |||||| | | ||||| || || | ||||| | | |||||| | || || ||| Sbjct 1212852 ATAGATCCCAAGTTACATACAGCGATTTCATTTGAAGAAGAATATTGAACAATTTCTGTA 1212793 Query 77742 CATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGA 77800 |||| ||| |||||| || | || | ||| | ||| || || || ||| || ||| Sbjct 1212792 CATAAATTTGAACATTTTATGATTCCTAAATTATTTTGATTACTTTTACGATTACAATGA 1212733 Query 77801 GTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCA 77860 || ||||||| || | || || || |||||||| || ||| || || ||| Sbjct 1212732 -TCTTTATAAACCATGTAAGGTGTTCCAGTTTCAATTTGACTTTCACATATTTTTTGCCA 1212674 Query 77861 GACGACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTC--TTTCATATTGAGTATAT 77918 || | || || || || | || || ||| | | | || ||||||||| | |||| Sbjct 1212673 GAGCATTCGTGCCTTGAT--TTGACTTCTATAACGTTTTTCATTTTCATATTTAACATAT 1212616 Query 77919 AGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATC 77978 | ||||||||| ||||||||| || ||| | || || ||||| | || |||||| Sbjct 1212615 AAAGTTTCAAATTCTTCTCCCCAACTATTATCAAGACCTGGACATTCGTGAGGACACATC 1212556 Query 77979 AATGACCAGTCACCATCTTCCTT--AACTCGTTTCATAAAGAGATCAGGTATCCATAGAG 78036 |||||||| | | ||| |||| ||| ||||||||||| | |||||| | ||||| | Sbjct 1212555 AATGACCAATAAGAATC--CCTTTCAACACGTTTCATAAATAAATCAGGAACCCATAAAC 1212498 Query 78037 CAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAA 78096 || ||||| ||| || | | | ||||| |||||||| || ||||||| | || Sbjct 1212497 CATAAAATAAATCACGAGCACGTTCCTCTTCCGGACCTGTATTTTTCTTAAGATTTAAAA 1212438 Query 78097 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTAT 78156 | | | |||||| | |||||||||||| | ||| || || | |||| |||| ||||| Sbjct 1212437 ATTGAAAAATATCTGCATGCCATGGTTCAATATAAATAGCAAATGCTCCTGGTCTTTTAT 1212378 Query 78157 TACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAA-TAATA 78215 | || || ||||| | ||| | || || | |||| | |||| ||||| |||| |||| Sbjct 1212377 TTCCACCTTGATCAACATAACGAGCAGTATCATTAAATACTCGTAACATAGGAACTAAT- 1212319 Query 78216 CCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATG 78275 || || || |||||||||||||| |||| || ||| | || ||||||||| ||| Sbjct 1212318 CCATTTGAAATTCCATTTGTTCCACTAATAAAAGATCCTGTGGCACGAATATTATTAACA 1212259 Query 78276 GATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAG 78335 || || | ||| ||||| || || |||| ||| ||| ||| | ||||| || Sbjct 1212258 CTTAGACCAACTCCACCTGCACCTTTTGAAATTATAGCACAATTTTTAAGAGTATCATAA 1212199 Query 78336 ATACCCTCTATACTGTCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATG 78394 ||||| ||||| ||||||| || |||||| || |||||| |||| ||| | Sbjct 1212198 ATACCTTCTATTGAATCATCCACCATTGTTAATAA-AAAACATGATGACAATTGTCCTTT 1212140 Query 78395 AACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAG 78454 |||||||||||| ||||||| || |||||||| ||||||||||| ||| | || Sbjct 1212139 TGGTGTTCCTGCATTATATAATGTTGGTGATGCATGTAAAAACCATTTTTGAGACA-TAC 1212081 Query 78455 A-TTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCA 78513 | || |||||||||| | ||||| || || | |||||| || || || ||||||| Sbjct 1212080 AGTTATATGTTTCAAGTACAGATTCAATATCTTCTCCATGAATACCAACAGCAACACGCA 1212021 Query 78514 TCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTT 78573 | || | ||| || ||||||||||| | |||| ||| | ||||| |||||| || Sbjct 1212020 TAAAAAGATGTTGTGGTCTTTCAACAATACAGCTATTAATTCTTAACAAATATGATCGTT 1211961 Query 78574 CCAAAGTTTTAAAACCAAA-ATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAA 78632 |||| |||||||||||||| | ||| || || ||||| | | | || | ||| Sbjct 1211960 CCAACGTTTTAAAACCAAAGAAAGTAAAATTGTAA-TCTCTTTTATGATCGATTGCTGAA 1211902 Query 78633 TTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTTGA--AATAATAGG-- 78688 | || | | ||||| | ||| || ||| | || | | || | |||||| || Sbjct 1211901 TCTAATATTTCTTTATGTTTTTGAATAAT-TAAATTA-GTTTTTTCACTAATAATTGGAC 1211844 Query 78689 -AGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCT-TCCATTACATCACTA 78746 | || | |||||| ||| | || ||| | ||||| ||||| || | | Sbjct 1211843 TATGTCTTTTTGTATTTTT---ATTTATATTATTATA-CAATCTATCCATAACTTTTGAA 1211788 Query 78747 AATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCA 78806 || | || || |||| || || | ||| || | ||| ||||| | ||| | ||| || Sbjct 1211787 AAAACTTCTTCCGTTTGTTTATGCATATTTGAAATAGCAATTCTAGAAGCCAAAATGCCA 1211728 Query 78807 TAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCT 78866 |||||||||||| ||| | | | || || | ||| || ||||| |||| | || Sbjct 1211727 TAATCAGGATGTATAACAGTTCTATTAGCAGCAACTTCAGCTGCTAAGTTATCAAGTTCA 1211668 Query 78867 ATAGTTGTGACCCCATTATATAGTCCTTGAATAAC 78901 | ||| || || || ||||||| |||||||| ||| Sbjct 1211667 ACAGTAGTTACACCTTTATATAATCCTTGAACAAC 1211633 >seq39 Length=206625 Score = 239 bits (264), Expect = 6e-58 Identities = 570/848 (67%), Gaps = 14/848 (2%) Strand=Plus/Plus Query 47792 TCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGAG---ACATAACTCCCAT 47848 || |||||| ||| |||| || | |||| | ||||||| || ||||||| ||||| Sbjct 48598 TCATTAAAAATCAGCATCCAAGGTAAAAGTACGTTCTTCTTCAGTGCACATAAC-CCCAT 48656 Query 47849 TT-TTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATAT 47907 | ||||||||||| || || || || ||||| || || ||||| | ||| | | Sbjct 48657 ATCTTTGATATTCAGAAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTCAATTGAAAGGT 48716 Query 47908 TTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAA 47967 || |||| |||||||||||||| | |||||||||||| | || ||| | | Sbjct 48717 TTACCATGAAATCAAATGGATTTTTAACCTTATAAATTTTTGGCATGTTTAGTTCAGTTA 48776 Query 47968 TCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAA 48027 || ||| ||||| |||| || || | ||| | | ||||||| || || | Sbjct 48777 AAAGGTGATCAGCAACATATTCAATGTAGGTACACATTAATCTTGAATTCATACCAATCA 48836 Query 48028 GTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTA 48087 | ||| || ||||| || || | | | || | || || |||||||| |||| Sbjct 48837 TATCAACAGGAAGAGCATCAGTTAAATATTCCTTCTCAATTTCGACAGCATTTCTAATTA 48896 Query 48088 TCG-ATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCA 48146 | ||| || | | || ||| || | | || ||||||| | ||| ||| Sbjct 48897 TTTCATGCACACGCT-CTACAGACGGTTTATTCTCAAGATAACTAAACATGAGACAAGCA 48955 Query 48147 AAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGC 48206 ||||| | ||| | ||||||||||| |||||||| || ||| | ||| ||| Sbjct 48956 AAATCTCTATGTAATCCTTCATCTCTGGAGATTAATTCATTTGAATGACACAAACCTGGC 49015 Query 48207 ATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCT 48266 |||| |||||||||||| | |||||| |||| || ||||| ||||| || ||||| ||| Sbjct 49016 ATTAATCCACGTTTTTTTAACCAAAAGATTGAAGCAAAAGAACCAGAGAAAAATATTCCT 49075 Query 48267 TCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA-CTGGCTTC--GTTGTGTATCCAC 48323 || || || ||||| || ||| | ||||| || || ||| | || ||||| Sbjct 49076 TCAACAGCGGCAAAAGCAATAATACGTTCTCCAAAAGATGCATTCTTATCGTTAATCCAT 49135 Query 48324 CGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGT-TTCTATAGCATTAAAGAG 48382 | | |||||||||||||||||||| | | || || | | || |||||| || || Sbjct 49136 CTTAAAGCCCAATCAGCCTTCTTCTTGATA-AATTCAAACTCTGTTAAAGCATTGAAAAG 49194 Query 48383 AAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGA 48442 ||| |||||| | || | || || || ||||| |||||| || Sbjct 49195 CTTATTTCTTTCATCAGTGTCACGGATATATGTTTCAATTAACTTGGAATACATCTCACT 49254 Query 48443 GTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502 |||||||| || || || || |||||||| ||||| | | ||||| | || || || Sbjct 49255 ATGAATATTCTCCATAGCAATTTGAAATCCATAAAAGAAACGTGCTTCAGGGACTTGGAC 49314 Query 48503 CTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAA 48562 || | |||||| |||| ||||||| ||||| || |||||||| ||||||||| || Sbjct 49315 TTCTTTTGAAAATCTTTCAACCAAATTTTCATTGACAATTCCATCGGAAGCAGCAAAGAA 49374 Query 48563 TGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT-CCAGTCATTGA 48621 |||| ||| | ||||| ||| |||| ||| ||||| || ||| |||||| | | Sbjct 49375 GGCTAGGACACGAGATATAAAGTATCTTTCATTGTCAGTCA-TTGATTCCCAGTCTCTCA 49433 Query 48622 TATCTTTT 48629 |||||||| Sbjct 49434 TATCTTTT 49441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694653083118400