Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq15 829 0.0 seq5 688 0.0 seq39 271 1e-67 >seq15 Length=622252 Score = 829 bits (918), Expect = 0.0 Identities = 1474/2133 (69%), Gaps = 43/2133 (2%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 |||||| |||| | || || ||||| ||||| |||| ||| | ||||||| | |||| Sbjct 204878 GCTGGTCTTGTTCTTAAGTAATACATTCCAGTCTTTAAACCACGTTTCCATCCATGGAAA 204819 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 ||||| | | || ||| | || | |||| ||||| ||| | || ||| | Sbjct 204818 TGCATAGAACTACATACGGCATATGTTGGTTTTGCTACATGAAGATTAAGTGATTGAGAT 204759 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577 ||||| ||| ||||||| | |||||| ||||| | || || |||||||| ||||||| Sbjct 204758 TGATCAATGTAAGCTCCACGATCAGCAGCCATCTCAATGATATCCTTTTGAGAAATTTCC 204699 Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTG---TATTTTGAATGGAT 75634 |||| ||| || ||| || ||||||| ||| | | |||||||||| || Sbjct 204698 CAAACAGTCTTATAAAGTTCCTTGATATGTGTTGGTATTCCAGCGATATTTTGAATTGAA 204639 Query 75635 CCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694 || || ||||||||| |||| | | || ||| ||||||| || || | ||| Sbjct 204638 CCATTATTTGATATAATTTCATTCATAACTTCTTCACTCCACAAGTTAAGGTCAATCAAA 204579 Query 75695 ACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAA 75754 || |||| |||||||||||||||||||| || |||||||| | || | || || | Sbjct 204578 TCTTTAAGAAGATGAGGATTAACAATTTGGAAGTCTCCAGAGAGAACACGACGTGTAAAT 204519 Query 75755 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCA 75814 |||||| ||||||||||| | ||||||||| || || | |||||| ||||| |||||| Sbjct 204518 ATATTAGAAGTATATGGTTCAATAGATTCATTATTCCCTAGAATTTGGGCAGTAGAAGCA 204459 Query 75815 GTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 75874 || ||||| || || | || | |||||| | |||||| | ||||| || || Sbjct 204458 GTTGGCATTGGAGCTAATAAAAGGGAATTTCTTACACCATGCTTGGCAATTTTTTCCTTC 204399 Query 75875 AGATATTT---CCAATCCCA-AAGAT-CTGATGGTACAACATCCCAGAGATCGTATTGTA 75929 | |||| ||||||||| ||| | || |||| |||| ||| | ||| ||||||| Sbjct 204398 A---ATTTAGCCCAATCCCATAAGTTACT--TGGTGTTACATTCCACATATCATATTGTA 204344 Query 75930 GAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTA 75989 |||||| || | | |||||||| ||||||||| || | || ||||| |||||| Sbjct 204343 AAATTCCTTTAGAAACTGGTGATCCATGATATGTTTCATATGGTCCATCCTTAGCAGCTA 204284 Query 75990 GTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGAT 76049 |||||| ||||| || || || | |||||| ||||| ||||| ||||||||||| | Sbjct 204283 ATTCGCAGGAAGCCTCCAAAGCTCCATGATAAATAGTTTCAAAAATTTTCTTATTAAGTT 204224 Query 76050 CTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCT 76109 ||| || | || || ||||| | ||| ||||| ||| |||| ||| | Sbjct 204223 CTTTGGCCCGAGGAGATGTGAATGGATATCTCATAAGCATAAAACAATCAGCTAATCCTT 204164 Query 76110 GAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGT 76169 |||| ||||| ||||| || | |||||| || || | | || || || | ||| | Sbjct 204163 GAACACCAATTCCAATGGGGCGATGTCTAAAGTTTGATTTCTTTGCCTCAGGTACAGGAT 204104 Query 76170 AATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTA 76229 ||||||| | ||| ||||||||||| | |||| | ||| | ||| || | | Sbjct 204103 AATAATTGACATCAATAATTTTATTCAAATTTTTAGCAAGAATCTTAGAAACAAGATGAA 204044 Query 76230 GTTTGAGAAAATCAAAT-----------TTTCCATCTATCA-CAAACATATTAAGAGCTA 76277 ||| ||||| |||| |||| ||||| | || |||| | || | Sbjct 204043 GTTGATTAAAATTAAATGATGGTTGCCCTTTCTCAATATCAACGAATCTATTCAATGCAA 203984 Query 76278 TAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGC 76337 | ||| ||| ||||||||| || || |||| | | ||||| | || || || | Sbjct 203983 TTGATCCTAAATTACAAACAGCAACTTCATCTGGAGCACAATATTCAACAATTTCAGTAC 203924 Query 76338 ATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA-TGAG 76396 | |||||| ||| || || ||||| | |||||||| || || ||| | ||||| ||| Sbjct 203923 AAAGATTAGAACATTTAATTGTTCCCAAGTTTTGTTGATTACTTTTTCTATTACAATGA- 203865 Query 76397 TCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAG 76456 ||||| |||| | | | |||||||||||||| || || ||| ||| || ||| Sbjct 203864 TCCTTGTAAACCATATATGGAGTTCCAGTTTCTATTTGACTTTCACAAATCTTTTGCCAA 203805 Query 76457 ACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAAC 76516 | || ||||| || ||| | |||| |||||||| | ||||| | ||| || || Sbjct 203804 ATAACCCTAGCCTTGATTTGTTTTCTGTAACGCTTCTCAGTCTCATACTTTGTGTACAAT 203745 Query 76517 CGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAAT 76576 |||||||||||| |||||| ||| || || || |||||||||| |||||||||||| Sbjct 203744 TTTTCAAATTCATCCCCCCAACAATCTTCTAATCCTGGACATTCATGAGGACACATCAAT 203685 Query 76577 GACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATA 76636 ||||| | ||||| | ||| ||||||||||| | |||||| | ||||| | || Sbjct 203684 GACCAATATGAATCTTTTTCAACACGTTTCATAAACAAATCAGGAACCCATAAACCATAG 203625 Query 76637 AATAGATCTCGGGTTCTACGTTCTTCATTT---CCTGTATTCTTTTTAAGATCTAGGAAC 76693 |||| ||| || | |||||| || | | |||||||| || |||||||| | || Sbjct 203624 AATAAATCACGAGC---ACGTTCCTCTTCTGGTCCTGTATTTTTCTTAAGATCCAAAAAT 203568 Query 76694 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTA 76753 ||||||||||| | |||||||||||| | ||| || || | | | || |||| ||||| Sbjct 203567 TCCATAATATCTGCATGCCATGGTTCCAAATAAATTGCAAAAGCTCCAGGTCTCTTATTT 203508 Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||| | |||||| ||||| || || |||||||||||||||| | | || Sbjct 203507 CCACCTTGATCAACATATCTTGCAGTATTGTTGAAAACTCTCAACATTGGTACCAATCCA 203448 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| ||||| |||||| |||| | |||| ||||||||| | || | | Sbjct 203447 TTTGATGTTCCATTAGTTCCACCAATAAATGATCCATTGGCACGAATACAATGAACATTT 203388 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || || ||||| || ||| || |||| |||||| |||||||||| ||||| || Sbjct 203387 AATCCAATACCTCCAGCAGATTTTGAAATTAAAGCACATTGTTTCAATGTATCATAAATC 203328 Query 76934 CCCTCTATACTATCATCCATCA--TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAA 76991 || || ||| ||| |||| | |||||| |||||| || ||||| ||| || || Sbjct 203327 CCTTCAATAGAATC-TCCAGCCATTGTTAATAAGAAA-CATGAAGACAATTGTGGACGAG 203270 Query 76992 CAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGAT 77051 |||||||||||||| | ||| ||||| ||||| || |||||||| | || | | || Sbjct 203269 TTGTTCCTGCATTAAATAGTGTTGGAGAAGCATGTGTAAACCATTTCTGTGACATAAAAT 203210 Query 77052 TGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCA 77111 |||||||||| ||||||| || ||||| | |||||| || ||||| || | ||| | Sbjct 203209 TGTATGTTTCGATAACTGAATCAATATCTTCTCCATGAATACCAACAGCAACTCTCATAA 203150 Query 77112 ACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 77171 | ||| || |||| ||| || | || || || ||||| || | || || ||| | Sbjct 203149 GTAAATGTTGTGGTCTTTCAGCAATTTTCTTGTTGATTTTTAAAAGATAAGAACGTTCTA 203090 Query 77172 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231 ||||||| || ||||| | ||| ||||||||| || |||| ||| | ||||| | Sbjct 203089 AAGTTTTGAATCCAAAGAATGAGTAGTCAAAGTCTCTGTCATAAACGATAGCAGAATTAA 203030 Query 77232 GTTTGTC--CTTATATTTG-GTAACAATATCCATGACAGTGGTAGAAATAATTGGAGATC 77288 ||||||| | | | |||| | ||| | | ||| | | ||| ||||| | Sbjct 203029 GTTTGTCAGCATGTTTTTGAATTACATTGT--ATGTTTCT-TCACTAATCATTGGTGTAT 202973 Query 77289 GTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtt 77348 ||| ||| | || || | ||| | | | | ||| ||| || || ||| || Sbjct 202972 GTACACCAGTAATATCATGACGATAATGATACAGGTCACTCATAACTTCTGAGAATGTTT 202913 Query 77349 tttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAG 77408 | ||||||| || || | || || | || ||||| || || | ||| ||||| |||| Sbjct 202912 TCTTTGTTTGTTTATGCATGTTGGAGATAGCGATTCTTGCTGCCAAAATAGCATAATCAG 202853 Query 77409 GATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAG 77468 |||| |||| || | | |||||| | ||||| || | |||| ||||| | |||| Sbjct 202852 GATGAAGTGTTGTCATGTTTGCTGCTGTCTCTGCGGCAAGGTTATCCAATTCAACGGTAG 202793 Query 77469 TAACTCCGTTATATAGCCCTTGAATAACTTTCA 77501 ||| || || |||| ||||| |||||||||| Sbjct 202792 AAACACCTTTGTATAAACCTTGGATAACTTTCA 202760 >seq5 Length=1449561 Score = 688 bits (762), Expect = 0.0 Identities = 1461/2139 (68%), Gaps = 65/2139 (3%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 |||||||| || | || ||| ||||| || ||||||| ||| || |||||||| ||| Sbjct 1213746 GCTGGTTTCGTTCTTAAATAATACATCCCTGTTTTTAAACCAAGTTTCCATCCGCGAAAA 1213687 Query 75458 TGCATG---CTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGA 75514 || ||| || || | | || | || | |||| || |||||| | || || Sbjct 1213686 TGTATGGAACTACATATTCCGTAAGAT---GGTTTTGCTACATAAATATTAAGAGATTGG 1213630 Query 75515 CTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATT 75574 |||||| || || ||||||||||| || ||||| | || ||| |||||||| ||| Sbjct 1213629 GATTGATCAATAAATGCTCCTCTATCTGCAGCCATATCAATGATGTCCTTTTGAGATATT 1213570 Query 75575 TCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA---TTTGTATTTTGAATG 75631 ||||| | || || | | | || |||| |||||||| || ||| || || Sbjct 1213569 TCCCATACGGTCTTATACAAATCCTTAATATGATCTGGAATTCCTTTAATATGTTTTATA 1213510 Query 75632 GATCCGCCATCAGATAT-AATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGT 75690 ||||| || | | || ||||| || | || |||||||||||||| ||| || Sbjct 1213509 GATCCATTATAATAAATTAATTGGTTTAATAAT-TCATCATTCCACAAATTTAATTCAAC 1213451 Query 75691 TAAAAC-TCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAG 75749 ||| | | ||| || || || || || | |||||| |||||||||||||| | || Sbjct 1213450 CAAATCGTGTAAA-AGGTGTGGGTTTACCACTTGAAAATCTCCAGACAATACCCGTCTCA 1213392 Query 75750 TGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTG 75809 | || | ||| ||||| ||||| | || ||||| || || |||||||||||||||| Sbjct 1213391 TATACAAATTTGAAGTATAAGGTTCAAATGACTCATTATTACCAAAAATTTGAGCAGTTG 1213332 Query 75810 AAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTAT 75869 | || || ||||| || || ||||| || |||||| | ||||| | |||| ||||| | Sbjct 1213331 ATGCTGTTGGCATTGGAGCTACCAACAATGAATTTCTTATACCATATTTTCTAATTTTTT 1213272 Query 75870 CTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTA 75929 |||||| || ||||||||| | || ||| ||| | ||| | ||| ||||||| Sbjct 1213271 CTTTTAATAATGACCAATCCCATAAATTACTTGGAGTAACTTTCCATAAATCATATTGTA 1213212 Query 75930 GAATTCCGTT-GCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCT 75988 ||| || | || | | || || | ||| ||||| |||| || | | ||||||| Sbjct 1213211 AAATGCCACGAGATACAAGA-GAACCTTCATAAGTTTCATAAGGACCATATTCTTCAGCT 1213153 Query 75989 AGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGA 76048 | ||| || || || || ||||| | ||| |||||||| || || || || || | | Sbjct 1213152 AATTCACATGAAGCTTCCAATGCACCATGATATATTGTTTCAAATATTTTTTTGTTTAAA 1213093 Query 76049 TCTTGCGCTTC--AAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTC 76106 |||| |||| |||| | | | ||||| |||||| ||||| | |||||| | || Sbjct 1213092 TCTTTAGCTTGTGAAGA--AGCGTAGGGATATCTTAAAAGTATAAAAGTATCTGCCAATC 1213035 Query 76107 CCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAG 76166 | ||||| ||||| |||||||| | |||| || |||| || || || |||| | | Sbjct 1213034 CTTGAACACCAATGCCAATAGGACGATGTTTCATATTTGATATACGAGTTTCTTCTAATG 1212975 Query 76167 GGTAATAATTAATATCTATAATTTTATTGAGATTTCTG----ACA----ACTACTTTAAC 76218 | |||||||| |||||||| || ||||| | |||| | | | | || ||| Sbjct 1212974 GATAATAATTTATATCTATTATCTTATTCAAATTTTTTGTTAAAAGTTTAGTAATTTTGT 1212915 Query 76219 CACGTCCTTTAGT-TTGA--GAA--AATCAAATTTTCCATCTATCA-CAAACATATTAAG 76272 | || |||| |||| ||| |||| || ||| | | ||| |||| |||| | Sbjct 1212914 GAAGTTGTTTAAAATTGAATGAAGTAATCCCATCTTC--TTTTTCAACAAATCTATTTAA 1212857 Query 76273 AGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTC 76332 ||| |||||| | | ||||| || || | ||||| | | | |||||| | || || Sbjct 1212856 AGCAATAGATCCCAAGTTACATACAGCGATTTCATTTGAAGAAGAATATTGAACAATTTC 1212797 Query 76333 CGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA 76392 || |||| ||| ||| || || |||| | ||| | ||| || || || ||||| Sbjct 1212796 TGTACATAAATTTGAACATTTTATGATTCCTAAATTATTTTGATTACTTTTACGATTACA 1212737 Query 76393 -TGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATT 76451 ||| || ||||||| | | || |||||||||||||| || ||| || || Sbjct 1212736 ATGA-TCTTTATAAACCATGTAAGGTGTTCCAGTTTCAATTTGACTTTCACATATTTTTT 1212678 Query 76452 TCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTAT 76511 ||||| | || || || ||| | | | || || || || ||||||||| || Sbjct 1212677 GCCAGAGCATTCGTGCCTTGATTTGACTTCTATAACGTTTTTCATTTTCATATTTAACAT 1212618 Query 76512 ATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACA 76571 |||| ||||||||| ||||||||| || ||| | ||| |||||||| | ||||||| Sbjct 1212617 ATAAAGTTTCAAATTCTTCTCCCCAACTATTATCAAGACCTGGACATTCGTGAGGACACA 1212558 Query 76572 TCAATGACCACTCACCATCTTCCTT--AACCCGTTTCATAAAGAGATCAGGTATCCATAG 76629 |||||||||| | | ||| |||| ||| ||||||||||| | |||||| | ||||| Sbjct 1212557 TCAATGACCAATAAGAATC--CCTTTCAACACGTTTCATAAATAAATCAGGAACCCATAA 1212500 Query 76630 AGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT---CCTGTATTCTTTTTAAGATC 76686 | || ||||| ||| || | |||||| || | |||||||| || ||||||| Sbjct 1212499 ACCATAAAATAAATCACGAGC---ACGTTCCTCTTCCGGACCTGTATTTTTCTTAAGATT 1212443 Query 76687 TAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCG 76746 || || | | |||||| | |||||||||||| | ||| || || | | || |||| Sbjct 1212442 TAAAAATTGAAAAATATCTGCATGCCATGGTTCAATATAAATAGCAAATGCTCCTGGTCT 1212383 Query 76747 TTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAA- 76805 |||||| || || ||||| | ||| | ||||| | |||| | |||| ||||| |||| Sbjct 1212382 TTTATTTCCACCTTGATCAACATAACGAGCAGTATCATTAAATACTCGTAACATAGGAAC 1212323 Query 76806 TAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTAC 76865 |||| || || || | |||||||||||| |||| || ||| |||||||||||| Sbjct 1212322 TAAT-CCATTTGAAATTCCATTTGTTCCACTAATAAAAGATCCTGTGGCACGAATATTAT 1212264 Query 76866 TAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGT 76925 ||| | ||| || | ||| ||||| ||| || |||| |||||| ||| | || | Sbjct 1212263 TAACACTTAGACCAACTCCACCTGCACCTTTTGAAATTATAGCACAATTTTTAAGAGTAT 1212204 Query 76926 CATAGATGCCCTCTATACTATCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGA 76984 |||| || || ||||| |||||||| || |||||| || |||||| |||| ||| Sbjct 1212203 CATAAATACCTTCTATTGAATCATCCACCATTGTTAATAA-AAAACATGATGACAATTGT 1212145 Query 76985 TGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAA 77044 | |||||||||||| | ||||| || |||||||| |||||||||| ||| Sbjct 1212144 CCTTTTGGTGTTCCTGCATTATATAATGTTGGTGATGCATGTAAAAACCATTTTTGAGAC 1212085 Query 77045 AGTAGA-TTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGAC 77103 | || | || |||||||||| || | ||| ||||| | |||||| || ||||| || Sbjct 1212084 A-TACAGTTATATGTTTCAAGTACAGATTCAATATCTTCTCCATGAATACCAACAGCAAC 1212026 Query 77104 ACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGA 77163 |||||| || | ||| || |||| ||| ||| | |||| ||| | ||||| ||||| Sbjct 1212025 ACGCATAAAAAGATGTTGTGGTCTTTCAACAATACAGCTATTAATTCTTAACAAATATGA 1211966 Query 77164 TTTTTCCAAAGTTTTAAAACCAAA-ATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAA 77222 | |||||| |||||||||||||| | ||| || || ||||||| | | || Sbjct 1211965 TCGTTCCAACGTTTTAAAACCAAAGAAAGTAAAATTGTAA-TCTCTTTTATGATCGATTG 1211907 Query 77223 CCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGT-AGAAATAATT 77281 | |||| || | | || |||| ||| || ||| | || | | | | ||||||| Sbjct 1211906 CTGAATCTAATATTTCTTTATGTTTTTGAATAAT-TAAATTAGTTTTTTCACTAATAATT 1211848 Query 77282 GG---AGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCT-TCCATTACGTC 77337 || | || | || |||||| ||| | || ||| | || ||| ||||| || | Sbjct 1211847 GGACTATGTCTTTTTGTATTTTT---ATTTATATTATTATACAA-TCTATCCATAACTTT 1211792 Query 77338 GCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAAT 77397 ||| | || || |||| || || | ||| || | || ||||||| ||| | ||| Sbjct 1211791 TGAAAAAACTTCTTCCGTTTGTTTATGCATATTTGAAATAGCAATTCTAGAAGCCAAAAT 1211732 Query 77398 TGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAA 77457 |||| ||||||||| ||| | | || || | ||| || ||||| |||| | Sbjct 1211731 GCCATAATCAGGATGTATAACAGTTCTATTAGCAGCAACTTCAGCTGCTAAGTTATCAAG 1211672 Query 77458 TTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAAC 77496 ||| | |||||| || || ||||||| ||||||| ||| Sbjct 1211671 TTCAACAGTAGTTACACCTTTATATAATCCTTGAACAAC 1211633 >seq39 Length=206625 Score = 271 bits (300), Expect = 1e-67 Identities = 583/854 (68%), Gaps = 17/854 (2%) Strand=Plus/Plus Query 46277 TGAT-TCTTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTT--GTG-ACATAACT 46332 |||| || |||||| || |||| || | |||| | ||||||| ||| ||||||| Sbjct 48593 TGATATCATTAAAAATCAGCATCCAAGGTAAAAGTACGTTCTTCTTCAGTGCACATAAC- 48651 Query 46333 CCCATTT-TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGA 46391 ||||| | |||| |||||| || || || || ||||| || || ||||| | ||| Sbjct 48652 CCCATATCTTTGATATTCAGAAACTTTCTTTTCAAAGAAATTTGTCTTTCCTTCAATTGA 48711 Query 46392 TATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTC 46451 | ||| |||| |||||||| ||||| |||| |||||||||||| | || ||| Sbjct 48712 AAGGTTTACCATGAAATCAAATGGATTTTTAACCTTATAAATTTTTGGCATGTTTAGTTC 48771 Query 46452 TGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCC 46511 | | || ||| ||||| |||| || || || ||| | | ||||||| || Sbjct 48772 AGTTAAAAGGTGATCAGCAACATATTCAATGTAGGTACACATTAATCTTGAATTCATACC 48831 Query 46512 TATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGA 46571 || | | || || ||||| || || | | | || | ||||| |||||||| Sbjct 48832 AATCATATCAACAGGAAGAGCATCAGTTAAATATTCCTTCTCAATTTCGACAGCATTTCT 48891 Query 46572 TATTATCG-ATGTTACTGTTTCCTCACTTGGTGGATGCATCAA-ATGTTTAAACATTAAA 46629 ||||| ||| || || || ||| || | |||| || ||||||| | | Sbjct 48892 AATTATTTCATGC-ACACGCTCTACAGACGGTTTATTC-TCAAGATAACTAAACATGAGA 48949 Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 || |||||||| | ||| | ||||||||||| |||||||| || ||| | Sbjct 48950 CAAGCAAAATCTCTATGTAATCCTTCATCTCTGGAGATTAATTCATTTGAATGACACAAA 49009 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749 || ||||||| |||||| ||||| | |||||| || | || ||||| ||||| || ||| Sbjct 49010 CCTGGCATTAATCCACGTTTTTTTAACCAAAAGATTGAAGCAAAAGAACCAGAGAAAAAT 49069 Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTA---TGA 46806 || ||||| ||||| || || || | || | ||||| || |||| ||| | | Sbjct 49070 ATTCCTTCAACAGCGGCAAAAGCAATAATACGTTCTCCAAAAGATGCATTCTTATCGTTA 49129 Query 46807 ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGT-TTCTATAGCATT 46865 ||||| ||| ||||||||||||||| ||||| | | || || | | || |||||| Sbjct 49130 ATCCATCTTAAAGCCCAATCAGCCTTCTTCTTGATA-AATTCAAACTCTGTTAAAGCATT 49188 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925 || || ||| |||||||| | || | |||||| || ||||| |||||| Sbjct 49189 GAAAAGCTTATTTCTTTCATCAGTGTCACGGATATATGTTTCAATTAACTTGGAATACAT 49248 Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985 || |||||| || || ||||| || |||||||| ||||| | | |||||||| | Sbjct 49249 CTCACTATGAATATTCTCCATAGCAATTTGAAATCCATAAAAGAAACGTGCTTCAGGGAC 49308 Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGC 47045 || || ||| | |||||| |||| |||||| ||||| || |||||||| |||||| Sbjct 49309 TTGGACTTCTTTTGAAAATCTTTCAACCAAATTTTCATTGACAATTCCATCGGAAGCAGC 49368 Query 47046 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATT-CCAGT 47104 ||| || || | ||| | ||||| ||| |||||| | ||||| || ||| ||||| Sbjct 49369 AAAGAAGGCTAGGACACGAGATATAAAGTATCTTTCATTGTCAGTCA-TTGATTCCCAGT 49427 Query 47105 CATTGATATCTTTT 47118 | | ||||||||| Sbjct 49428 CTCTCATATCTTTT 49441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712918269859200