Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq858 89.7 3e-13 >seq858 Length=1962 Score = 89.7 bits (98), Expect = 3e-13 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 1201 CGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCT 1260 ||||||||| || | || |||||| | ||||||| | | ||||| |||||| ||| Sbjct 1865 CGACATGGCGCTGCCGCCCTGCCACTGCCTGTTCCAATTCTTCGTCGCCGACGGAAAGCT 1806 Query 1261 CTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCG 1319 ||||| || | || || ||| || || ||||||| || ||||||||||| |||| Sbjct 1805 GA-GCTGCCAGCTGTATCAACGCTCAGCCGATGTGTTCCTAGGGGTGCCGTTCAACATCG 1747 Query 1320 CCTCGTACGCGCTCCTCGCGCACATG 1345 |||| ||||| || ||| |||||||| Sbjct 1746 CCTCCTACGCCCTGCTCACGCACATG 1721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296124667530810